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IDSAVERM_4864 TypeCDS
From5914570 nt length1011
To5915580 aa length336
GenegrcC pI4.58
Definitionputative polyprenyl diphosphate synthase M.W (Da)35852
Noteprobably geranylgeranyl pyrophosphate synthase, PF00348: Polyprenyl synthetase AseI frg.I
SignalP v.4.0Non-secretory protein | plot Categorymetabolism of coenzymes & prosthetic groups

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4583 putative transferase6130.0e+00
sgrSGR_2964 putative polyprenyl diphosphate synthase5600.0e+00
samSAM23877_4418 Isoprenyl diphosphate synthase6200.0e+00
scabSCAB37831 putative polyprenyl diphosphate synthase5950.0e+00
saceSACE_6888 polyprenyl diphosphate synthase component3081.0e-104
nfarnfa51220 polyprenyl diphosphate synthase2886.1e-79
mtubgi|15607702 PROBABLE POLYPRENYL-DIPHOSPHATE SYNTHASE GRCC1 (POLYPRENYL PYROPHOSPHATE SYNTHETASE) [Mycobacterium tuberculosis H37Rv]2784.8e-76
cglugi|19551716 COG0142:Geranylgeranyl pyrophosphate synthase [Corynebacterium glutamicum]2691.6e-73
bsubBG10281 hepA, gerCC, gerC58, gerC3; heptaprenyl diphosphate synthase component II [EC:2.5.1.30]1717.3e-44
ecoligi|16131077 octaprenyl-diphosphate synthase [Escherichia coli K12]1691.8e-43
paerPA4569 [gene=ispB] [prot=octaprenyl-diphosphate synthase] [comment=PA4569]1694.3e-43

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

polyprenyl_synt1Polyprenyl synthetase41-254202.17e-60

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498337.1 polyprenyl synthetase family protein [Streptomyces sp. SID54... 16660.0e+00
WP_095748175.1 polyprenyl synthetase family protein [Streptomyces sp. SA15]... 16290.0e+00
WP_124439967.1 polyprenyl synthetase family protein [Streptomyces sp. NL15-... 16290.0e+00
WP_067019144.1 polyprenyl synthetase family protein [Streptomyces dysideae]... 16230.0e+00
WP_053752851.1 polyprenyl synthetase family protein [Streptomyces sp. MMG15... 16220.0e+00
WP_006377887.1 MULTISPECIES: polyprenyl synthetase family protein [Streptom... 16200.0e+00
WP_224740033.1 polyprenyl synthetase family protein [Streptomyces sp. PSKA3... 16190.0e+00
WP_069762763.1 polyprenyl synthetase family protein [Streptomyces sp. LUP47... 16190.0e+00
WP_232032380.1 polyprenyl synthetase family protein [Streptomyces lincolnen... 16180.0e+00
WP_189151757.1 polyprenyl synthetase family protein [Streptomyces lacrimifl... 16180.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.0987 Seems to have no N-terminal signal seq.