| ID | SAVERM_4868
| Type | CDS
|
| From | 5919328
| nt length | 894
|
| To | 5920221
| aa length | 297
|
| Gene |
| pI | 8.45
|
| Definition | putative ABC transporter permease protein
| M.W (Da) | 30985
|
| Note | PF01061: ABC-2 type transporter
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4586 putative ABC transporter integral membrane protein | 457 | 2.0e-164
|
| sgr | SGR_2961 putative ABC transporter permease protein | 376 | 4.0e-133
|
| sam | SAM23877_4421 putative ABC transporter integral membrane protein | 458 | 4.0e-165
|
| scab | SCAB37791 putative ABC transporter permease protein | 432 | 1.0e-154
|
| sace | SACE_0994 putative ABC transporter integral membrane protein | 109 | 9.0e-29
|
| bsub | BG11587 yhcI; ABC-2 type transport system permease protein | 48 | 6.1e-07
|
| paer | PA3395 [gene=nosY] [prot=NosY protein] [comment=PA3395] | 51 | 1.1e-07
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC2_membrane_4 | 1 | ABC-2 family transporter protein | 61-222 | 43.3 | 3.6e-11
|
| ABC2_membrane_2 | 1 | ABC-2 family transporter protein | 94-241 | 38.9 | 5.7e-10
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_220140983.1 | ABC transporter permease [Streptomyces sp. KM273126]
| 775 | 3.7e-100 |
|
| 774 | 7.2e-100 |
| WP_067367391.1 | ABC transporter permease [Streptomyces olivochromogenes] >gb...
| 770 | 3.6e-99 |
| QIY97617.1 | ABC transporter permease [Streptomyces sp. S1D4-11]
| 768 | 9.2e-99 |
| WP_095853158.1 | MULTISPECIES: ABC transporter permease [unclassified Strepto...
| 767 | 1.1e-98 |
| MPY55193.1 | ABC transporter permease [Streptomyces acidicola]
| 765 | 1.1e-98 |
| WP_168494533.1 | ABC transporter permease [Streptomyces sp. RLB1-33] >gb
| 767 | 1.2e-98 |
| WP_143627715.1 | MULTISPECIES: ABC transporter permease [unclassified Strepto...
| 766 | 1.5e-98 |
| WP_212727111.1 | ABC transporter permease [Streptomyces mirabilis] >gb
| 766 | 1.8e-98 |
| WP_097285801.1 | MULTISPECIES: ABC transporter permease [unclassified Strepto...
| 766 | 1.9e-98 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5501 | Seems to have no N-terminal signal seq.
|