| ID | SAVERM_4896
| Type | CDS
|
| From | 5949946
| nt length | 489
|
| To | 5949458
| aa length | 162
|
| Gene |
| pI | 5.42
|
| Definition | hypothetical protein
| M.W (Da) | 18010
|
| Note | PF04461: Protein of unknown function (DUF520)
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4614 conserved hypothetical protein | 300 | 6.0e-107
|
| sgr | SGR_2909 conserved hypothetical protein | 304 | 1.0e-108
|
| sam | SAM23877_4449 hypothetical protein | 295 | 3.0e-105
|
| scab | SCAB37371 hypothetical protein | 299 | 2.0e-106
|
| sace | SACE_6882 protein of unknown function DUF520 | 214 | 5.0e-73
|
| nfar | nfa51200 hypothetical protein | 226 | 7.5e-61
|
| mtub | gi|15607706 hypothetical protein Rv0566c [Mycobacterium tuberculosis H37Rv] | 216 | 7.8e-58
|
| bsub | BG13116 yitK; similar to hypothetical proteins | 127 | 4.2e-31
|
| ecoli | gi|16128411 hypothetical protein b0426 [Escherichia coli K12] | 127 | 2.8e-31
|
| paer | PA4395 [gene=PA4395] [prot=conserved hypothetical protein] [comment=PA4395] | 104 | 3.4e-24
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF520 | 1 | Protein of unknown function (DUF520) | 4-162 | 205.3 | 5.5e-61
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_028805132.1 | MULTISPECIES: YajQ family cyclic di-GMP-binding protein [Str...
| 810 | 1.8e-109 |
| WP_099500598.1 | MULTISPECIES: YajQ family cyclic di-GMP-binding protein [Str...
| 807 | 5.3e-109 |
| WP_101403673.1 | MULTISPECIES: YajQ family cyclic di-GMP-binding protein [Str...
| 806 | 7.1e-109 |
| WP_033177755.1 | MULTISPECIES: YajQ family cyclic di-GMP-binding protein [Str...
| 806 | 7.3e-109 |
| WP_142214233.1 | YajQ family cyclic di-GMP-binding protein [Streptomyces sp. ...
| 806 | 7.4e-109 |
| WP_037627493.1 | MULTISPECIES: YajQ family cyclic di-GMP-binding protein [Str...
| 805 | 9.1e-109 |
| WP_064069978.1 | MULTISPECIES: YajQ family cyclic di-GMP-binding protein [Str...
| 804 | 1.4e-108 |
| WP_099925456.1 | MULTISPECIES: YajQ family cyclic di-GMP-binding protein [Str...
| 804 | 1.4e-108 |
| WP_187741848.1 | MULTISPECIES: YajQ family cyclic di-GMP-binding protein [Str...
| 804 | 1.4e-108 |
| WP_084897896.1 | YajQ family cyclic di-GMP-binding protein [Streptomyces sp. ...
| 804 | 1.5e-108 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4591 | Seems to have no N-terminal signal seq.
|