| ID | SAVERM_4900
| Type | CDS
|
| From | 5956882
| nt length | 165
|
| To | 5957046
| aa length | 54
|
| Gene | rpmG2
| pI | 10.57
|
| Definition | putative ribosomal protein L33
| M.W (Da) | 6406
|
| Note | PF00471: Ribosomal protein L33
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4635 50S ribosomal protein L33 | 110 | 3.0e-35
|
| sgr | SGR_2884 50S ribosomal protein L33 | 110 | 5.0e-35
|
| sam | SAM23877_4455 50S ribosomal protein L33 2 | 110 | 2.0e-35
|
| scab | SCAB37321 putative ribosomal protein L33 | 110 | 3.0e-35
|
| sace | SACE_6877 50S ribosomal protein L33 type 2 | 87 | 5.0e-26
|
| nfar | nfa51190 rpmG2 ribosomal protein L33 | 93 | 2.6e-21
|
| mtub | gi|57116764 50S ribosomal protein L33 [Mycobacterium tuberculosis H37Rv] | 93 | 2.2e-21
|
| bsub | BG14180 rpmGA; possible ribosomal protein L33 | 75 | 5.0e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_L33 | 1 | Ribosomal protein L33 | 9-54 | 82.5 | 2e-23
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0844 | Seems to have no N-terminal signal seq.
|