| ID | SAVERM_4909
| Type | CDS
|
| From | 5965077
| nt length | 864
|
| To | 5965940
| aa length | 287
|
| Gene | nusG
| pI | 3.78
|
| Definition | putative transcription antitermination protein
| M.W (Da) | 31507
|
| Note | PF02357: Transcription termination factor nusG
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | DNA termination
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4647 nusG transcription antitermination protein | 373 | 1.0e-131
|
| sgr | SGR_2875 transcription antitermination factor NusG | 405 | 3.0e-144
|
| sam | SAM23877_4466 Transcription termination/antitermination protein NusG | 414 | 5.0e-148
|
| scab | SCAB37251 putative transcription antitermination protein | 414 | 1.0e-147
|
| sace | SACE_6872 putative transcription antitermination regulator | 257 | 3.0e-86
|
| nfar | nfa51160 nusG transcription antitermination regulator | 269 | 2.4e-73
|
| mtub | gi|15607779 transcription antitermination protein NusG [Mycobacterium tuberculosis H37Rv] | 255 | 2.7e-69
|
| cglu | gi|19551718 COG0250:Transcription antiterminator [Corynebacterium glutamicum] | 211 | 2.4e-56
|
| bsub | BG10162 nusG; transcription antitermination factor | 171 | 5.9e-44
|
| ecoli | gi|16131812 transcription antitermination protein NusG [Escherichia coli K12] | 128 | 3.8e-31
|
| paer | PA4275 [gene=nusG] [prot=transcription antitermination protein NusG] [comment=PA4275] | 133 | 1.6e-32
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| NusG | 1 | Transcription termination factor nusG | 99-201 | 82.3 | 2.6e-23
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_181650356.1 | transcription termination/antitermination protein NusG [Stre...
| 989 | 9.2e-133 |
| WP_075028541.1 | transcription termination/antitermination protein NusG [Stre...
| 978 | 5.3e-131 |
| WP_095853123.1 | transcription termination/antitermination protein NusG [Stre...
| 977 | 8.0e-131 |
| WP_097225078.1 | transcription termination/antitermination protein NusG [Stre...
| 977 | 8.0e-131 |
| WP_099921156.1 | MULTISPECIES: transcription termination/antitermination prot...
| 975 | 1.4e-130 |
| WP_138045177.1 | transcription termination/antitermination protein NusG [Stre...
| 975 | 1.6e-130 |
| WP_097285830.1 | transcription termination/antitermination protein NusG [Stre...
| 974 | 2.3e-130 |
| WP_189190362.1 | transcription termination/antitermination protein NusG [Stre...
| 973 | 3.0e-130 |
| WP_202498345.1 | transcription termination/antitermination protein NusG [Stre...
| 971 | 3.9e-130 |
| WP_190037491.1 | transcription termination/antitermination protein NusG [Stre...
| 972 | 4.0e-130 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3841 | Seems to have no N-terminal signal seq.
|