| ID | SAVERM_4918
| Type | CDS
|
| From | 5978523
| nt length | 471
|
| To | 5978993
| aa length | 156
|
| Gene | rpsG
| pI | 11.05
|
| Definition | putative ribosomal protein S7
| M.W (Da) | 17445
|
| Note | PF00177: Ribosomal protein S7p/S5e
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4660 30S ribosomal protein S7 | 314 | 1.0e-112
|
| sgr | SGR_2845 30S ribosomal protein S7 | 305 | 4.0e-109
|
| sam | SAM23877_4479 30S ribosomal subunit protein S7 | 314 | 9.0e-113
|
| scab | SCAB37111 putative ribosomal protein S7 | 312 | 6.0e-112
|
| sace | SACE_6840 30S ribosomal protein S7 | 273 | 2.0e-96
|
| nfar | nfa50770 rpsG ribosomal protein S7 | 274 | 2.9e-75
|
| mtub | gi|15607823 30S ribosomal protein S7 [Mycobacterium tuberculosis H37Rv] | 262 | 6.9e-72
|
| cglu | gi|19551737 COG0049:Ribosomal protein S7 [Corynebacterium glutamicum] | 237 | 2.2e-64
|
| bsub | BG19006 rpsG; 30S ribosomal protein S7 | 208 | 1.4e-55
|
| ecoli | gi|16131220 30S ribosomal protein S7 [Escherichia coli K12] | 180 | 3.4e-47
|
| paer | PA4267 [gene=rpsG] [prot=30S ribosomal protein S7] [comment=PA4267] | 189 | 7.5e-50
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_S7 | 1 | Ribosomal protein S7p/S5e | 1-149 | 199.9 | 1.5e-59
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_181650348.1 | MULTISPECIES: 30S ribosomal protein S7 [Streptomyces] >lcl
| 805 | 6.6e-109 |
| WP_003948651.1 | MULTISPECIES: 30S ribosomal protein S7 [Streptomyces] >gb
| 805 | 6.6e-109 |
| WP_003974303.1 | MULTISPECIES: 30S ribosomal protein S7 [Streptomyces] >sp
| 804 | 7.1e-109 |
| WP_073951511.1 | MULTISPECIES: 30S ribosomal protein S7 [Streptomyces] >gb
| 803 | 1.2e-108 |
| WP_003998848.1 | MULTISPECIES: 30S ribosomal protein S7 [Streptomyces] >gb
| 803 | 1.3e-108 |
| WP_055597737.1 | 30S ribosomal protein S7 [Streptomyces hirsutus]
| 803 | 1.3e-108 |
| WP_067240370.1 | MULTISPECIES: 30S ribosomal protein S7 [Streptomyces] >gb
| 802 | 1.7e-108 |
| WP_055706461.1 | MULTISPECIES: 30S ribosomal protein S7 [Streptomyces] >gb
| 802 | 1.9e-108 |
| WP_029386961.1 | MULTISPECIES: 30S ribosomal protein S7 [Streptomyces] >gb
| 802 | 1.9e-108 |
| WP_055553483.1 | MULTISPECIES: 30S ribosomal protein S7 [Streptomyces] >gb
| 801 | 2.1e-108 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1135 | Seems to have no N-terminal signal seq.
|