| ID | SAVERM_4936
| Type | CDS
|
| From | 5992620
| nt length | 369
|
| To | 5992988
| aa length | 122
|
| Gene | rplN
| pI | 10.81
|
| Definition | putative ribosomal protein L14
| M.W (Da) | 13371
|
| Note | PF00238: Ribosomal protein L14p/L23e
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4712 50S ribosomal protein L14 | 236 | 9.0e-83
|
| sgr | SGR_2824 50S ribosomal protein L14 | 233 | 7.0e-82
|
| sam | SAM23877_4508 50S ribosomal protein L14 | 238 | 6.0e-84
|
| scab | SCAB36841 putative ribosomal protein L14 | 238 | 7.0e-84
|
| sace | SACE_6826 50S ribosomal protein L14 | 211 | 4.0e-73
|
| nfar | nfa7740 rplN ribosomal protein L14 | 226 | 4.3e-61
|
| mtub | gi|15607854 50S ribosomal protein L14 [Mycobacterium tuberculosis H37Rv] | 226 | 3.4e-61
|
| cglu | gi|19551758 COG0093:Ribosomal protein L14 [Corynebacterium glutamicum] | 207 | 1.2e-55
|
| bsub | BG10758 rplN; 50S ribosomal protein L14 | 179 | 5.5e-47
|
| ecoli | gi|16131189 50S ribosomal protein L14 [Escherichia coli K12] | 170 | 2.9e-44
|
| paer | PA4253 [gene=rplN] [prot=50S ribosomal protein L14] [comment=PA4253] | 164 | 2.1e-42
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_L14 | 1 | Ribosomal protein L14p/L23e | 1-122 | 185.0 | 4e-55
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_030831680.1 | MULTISPECIES: 50S ribosomal protein L14 [Streptomyces] >gb
| 608 | 4.8e-80 |
| WP_055718836.1 | MULTISPECIES: 50S ribosomal protein L14 [Streptomyces] >gb
| 608 | 4.8e-80 |
| WP_087927567.1 | MULTISPECIES: 50S ribosomal protein L14 [Streptomyces] >gb
| 608 | 4.8e-80 |
| WP_030890733.1 | 50S ribosomal protein L14 [Streptomyces varsoviensis] >gb
| 608 | 4.8e-80 |
| WP_041985720.1 | MULTISPECIES: 50S ribosomal protein L14 [Streptomyces] >gb
| 608 | 4.8e-80 |
| WP_071364962.1 | 50S ribosomal protein L14 [Streptomyces colonosanans] >gb
| 608 | 4.8e-80 |
| WP_003992364.1 | MULTISPECIES: 50S ribosomal protein L14 [Streptomyces] >gb
| 608 | 4.8e-80 |
| WP_031510588.1 | MULTISPECIES: 50S ribosomal protein L14 [Streptomyces] >lcl
| 608 | 4.8e-80 |
| WP_093613756.1 | 50S ribosomal protein L14 [Streptomyces indicus] >emb
| 607 | 6.4e-80 |
| WP_100201538.1 | 50S ribosomal protein L14 [Streptomyces carminius] >gb
| 607 | 6.6e-80 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0709 | Seems to have no N-terminal signal seq.
|