| ID | SAVERM_4946
| Type | CDS
|
| From | 5997158
| nt length | 1317
|
| To | 5998474
| aa length | 438
|
| Gene | secY
| pI | 9.95
|
| Definition | putative preprotein translocase SecY subunit
| M.W (Da) | 47586
|
| Note | PF00344: eubacterial secY protein
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | protein secretion
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4722 secY preprotein translocase SecY subunit | 751 | 0.0e+00
|
| sgr | SGR_2814 putative preprotein translocase SecY | 764 | 0.0e+00
|
| sam | SAM23877_4518 preprotein translocase membrane subunit | 786 | 0.0e+00
|
| scab | SCAB36741 putative preprotein translocase SecY subunit | 753 | 0.0e+00
|
| sace | SACE_6813 preprotein translocase | 528 | 0.0e+00
|
| nfar | nfa7940 secY preprotein translocase subunit | 524 | 5.4e-150
|
| mtub | gi|15607872 preprotein translocase SecY [Mycobacterium tuberculosis H37Rv] | 528 | 2.8e-151
|
| cglu | gi|19551791 COG0201:Preprotein translocase subunit SecY [Corynebacterium glutamicum] | 465 | 2.1e-132
|
| bsub | BG10445 secY; preprotein translocase SecY subunit | 339 | 2.1e-94
|
| ecoli | gi|16131179 preprotein translocase SecY [Escherichia coli K12] | 334 | 6.0e-93
|
| paer | PA4243 [gene=secY] [prot=secretion protein SecY] [comment=PA4243] | 324 | 8.5e-90
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| SecY | 1 | SecY translocase | 74-421 | 393.6 | 5.3e-118
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202498348.1 | preprotein translocase subunit SecY [Streptomyces sp. SID546...
| 2117 | 0.0e+00 |
| WP_184964744.1 | preprotein translocase subunit SecY [Streptomyces echinatus]...
| 2073 | 0.0e+00 |
| WP_137303153.1 | preprotein translocase subunit SecY [Streptomyces galbus] >g...
| 2069 | 0.0e+00 |
| WP_067240343.1 | preprotein translocase subunit SecY [Streptomyces longwooden...
| 2068 | 0.0e+00 |
| WP_137308220.1 | preprotein translocase subunit SecY [Streptomyces lasalocidi...
| 2066 | 0.0e+00 |
| WP_128379199.1 | preprotein translocase subunit SecY [Streptomyces cavernae]
| 2065 | 0.0e+00 |
| WP_208033770.1 | preprotein translocase subunit SecY [Streptomyces cyanogenus...
| 2065 | 0.0e+00 |
|
| 2065 | 0.0e+00 |
| MYW15469.1 | preprotein translocase subunit SecY [Streptomyces sp. SID2955] >g...
| 2064 | 0.0e+00 |
| MYX95177.1 | preprotein translocase subunit SecY [Streptomyces sp. SID486]
| 2064 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5076 | Seems to have an uncleavable N-term signal seq
|