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IDSAVERM_4966 TypeCDS
From6014923 nt length1218
To6016140 aa length405
Gene pI10.67
Definitionhypothetical protein M.W (Da)43348
NotePF03734: ErfK/YbiS/YcfS/YnhG AseI frg.I
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0736 putative secreted protein2473.0e-81
sgrSGR_2645 conserved hypothetical protein2365.0e-77
samSAM23877_6791 putative secreted protein2481.0e-81
scabSCAB36541 hypothetical protein3894.0e-136
saceSACE_5726 ErfK/YbiS/YcfS/YnhG786.0e-18
nfarnfa11690 hypothetical protein732.3e-14
cglugi|19551794 COG1376:Uncharacterized BCR [Corynebacterium glutamicum]678.8e-13
paerPA0732 [gene=PA0732] [prot=hypothetical protein] [comment=PA0732]519.7e-08

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

YkuD1L,D-transpeptidase catalytic domain289-39848.98.3e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_237528890.1 L,D-transpeptidase [Streptomyces sp. SID5469] 13250.0e+00
GGN83410.1 hypothetical protein GCM10011579_072150 [Streptomyces albiflaves... 10757.7e-144
WP_229703582.1 L,D-transpeptidase [Streptomyces albiflavescens] 10751.1e-143
PBC96852.1 peptidoglycan hydrolase-like protein with peptidoglycan-binding d... 10549.5e-141
KOG31509.1 Tat pathway signal protein [Streptomyces resistomycificus] >gb 10541.7e-140
WP_095853080.1 MULTISPECIES: L,D-transpeptidase family protein [unclassifie... 10531.9e-140
WP_078632447.1 L,D-transpeptidase family protein [Streptomyces resistomycif... 10522.4e-140
GAX52285.1 murein L,D-transpeptidase [Streptomyces olivochromogenes] 10496.7e-140
WP_181650320.1 L,D-transpeptidase family protein [Streptomyces sp. WAC00263... 10497.3e-140
KUN47200.1 Tat pathway signal protein [Streptomyces olivochromogenes] 10499.9e-140

PSORT result

LocalizationCertaintyPSORT said
membrane0.2402 Seems to have no N-terminal signal seq.