| ID | SAVERM_4994
| Type | CDS
|
| From | 6044244
| nt length | 774
|
| To | 6043471
| aa length | 257
|
| Gene |
| pI | 10.31
|
| Definition | putative dehydrogenase
| M.W (Da) | 27320
|
| Note | PF00106: short chain dehydrogenase
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO4764 putative dehydrogenase | 457 | 3.0e-166
|
| sgr | SGR_2763 putative dehydrogenase | 461 | 2.0e-167
|
| sam | SAM23877_4578 Dehydrogenase | 467 | 6.0e-170
|
| scab | SCAB36271 putative dehydrogenase | 479 | 2.0e-174
|
| sace | SACE_7190 short-chain dehydrogenase/reductase SDR | 251 | 1.0e-84
|
| nfar | nfa53990 short chain dehydrogenase | 214 | 7.9e-57
|
| mtub | gi|15608682 Possible ketoacyl reductase [Mycobacterium tuberculosis H37Rv] | 143 | 1.0e-35
|
| cglu | gi|19553670 COG0300:Short-chain dehydrogenases of various substrate specificities [Corynebacterium glutamicum] | 127 | 5.2e-31
|
| paer | PA4832 [gene=PA4832] [prot=probable short-chain dehydrogenase] [comment=PA4832] | 163 | 1.6e-41
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| adh_short | 1 | short chain dehydrogenase | 3-188 | 143.7 | 4.2e-42
|
| adh_short_C2 | 1 | Enoyl-(Acyl carrier protein) reductase | 9-190 | 118.8 | 2.5e-34
|
| KR | 1 | KR domain | 3-141 | 42.6 | 5.7e-11
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | Seems to have no N-terminal signal seq.
|