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IDSAVERM_4996 TypeCDS
From6045156 nt length897
To6046052 aa length298
Gene pI5.45
Definitionputative LysR-family transcriptional regulator M.W (Da)31103
NotePF03466: LysR substrate binding domain AseI frg.I
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4766 putative transcriptional regulator5040.0e+00
sgrSGR_2761 putative LysR-family transcriptional regulator4684.0e-169
samSAM23877_4580 putative LysR-family transcriptional regulator4914.0e-178
scabSCAB36251 putative LysR-family transcriptional regulator5000.0e+00
saceSACE_0348 probable transcriptional regulator, LysR family2642.0e-88
paerPA1998 [gene=PA1998] [prot=probable transcriptional regulator] [comment=PA1998]1241.4e-29

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain89-295150.24.5e-44

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family5-6380.56e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498355.1 LysR family transcriptional regulator [Streptomyces sp. SID5... 12121.6e-166
WP_037939536.1 LysR family transcriptional regulator [Streptomyces toyocaen... 11811.3e-161
NGO13518.1 LysR family transcriptional regulator [Streptomyces scabichelini] 11508.0e-157
WP_206440535.1 LysR substrate-binding domain-containing protein [Streptomyc... 11471.7e-156
WP_217457829.1 LysR family transcriptional regulator [Streptomyces sp. BV28... 11445.7e-156
WP_189322481.1 LysR family transcriptional regulator [Streptomyces flaveus]... 11446.2e-156
WP_073724978.1 LysR family transcriptional regulator [Streptomyces sp. CB02... 11448.0e-156
WP_073932703.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 11439.0e-156
WP_145867696.1 LysR family transcriptional regulator [Streptomyces capillis... 11402.0e-155
WP_210572843.1 LysR family transcriptional regulator [Streptomyces sp. GESE... 11402.5e-155

PSORT result

LocalizationCertaintyPSORT said
membrane0.2275 Seems to have no N-terminal signal seq.