| ID | SAVERM_5021
| Type | CDS
|
| From | 6078590
| nt length | 1224
|
| To | 6079813
| aa length | 407
|
| Gene | purK
| pI | 5.83
|
| Definition | putative phosphoribosylaminoimidazole carboxylase ATPase subunit
| M.W (Da) | 44214
|
| Note | PF02222: ATP-grasp domain
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3060 purK phosphoribosylaminoimidazole carboxylase ATPase subunit PurK | 701 | 0.0e+00
|
| sgr | SGR_4477 putative phosphoribosylaminoimidazole carboxylase ATPase subunit | 669 | 0.0e+00
|
| sam | SAM23877_3112 N5-carboxyaminoimidazole ribonucleotide synthase | 660 | 0.0e+00
|
| scab | SCAB54851 putative phosphoribosylaminoimidazole carboxylase ATPase subunit | 689 | 0.0e+00
|
| sace | SACE_6486 phosphoribosylaminoimidazole carboxylase ATPase subunit | 398 | 4.0e-138
|
| nfar | nfa10000 purK phosphoribosylaminoimidazole carboxylase ATPase subunit | 378 | 4.3e-106
|
| mtub | gi|15610412 phosphoribosylaminoimidazole carboxylase [Mycobacterium tuberculosis H37Rv] | 385 | 3.6e-108
|
| cglu | gi|19551941 COG0026:Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Corynebacterium glutamicum] | 361 | 3.0e-101
|
| bsub | BG10701 purK; phosphoribosylaminoimidazole carboxylase II [EC:4.1.1.21] | 172 | 2.4e-44
|
| ecoli | gi|16128506 phosphoribosylaminoimidazole carboxylase [Escherichia coli K12] | 147 | 1.6e-36
|
| paer | PA5425 [gene=purK] [prot=phosphoribosylaminoimidazole carboxylase] [comment=PA5425] | 187 | 1.9e-48
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ATP-grasp | 1 | ATP-grasp domain | 135-308 | 157.5 | 2.2e-46
|
| CPSase_L_D2 | 1 | Carbamoyl-phosphate synthase L chain, ATP binding domain | 126-276 | 35.4 | 7.1e-09
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_237529532.1 | 5-(carboxyamino)imidazole ribonucleotide synthase [Streptomy...
| 1764 | 0.0e+00 |
| PKT71471.1 | 5-(carboxyamino)imidazole ribonucleotide synthase [Streptomyces p...
| 1717 | 0.0e+00 |
|
| 1712 | 0.0e+00 |
| WP_168492284.1 | MULTISPECIES: 5-(carboxyamino)imidazole ribonucleotide synth...
| 1712 | 0.0e+00 |
| KUN43369.1 | phosphoribosylaminoimidazole carboxylase [Streptomyces olivochrom...
| 1707 | 0.0e+00 |
| WP_189192113.1 | 5-(carboxyamino)imidazole ribonucleotide synthase [Streptomy...
| 1703 | 0.0e+00 |
| WP_234435825.1 | 5-(carboxyamino)imidazole ribonucleotide synthase [Streptomy...
| 1702 | 0.0e+00 |
| WP_190083459.1 | 5-(carboxyamino)imidazole ribonucleotide synthase [Streptomy...
| 1700 | 0.0e+00 |
| KOT96912.1 | phosphoribosylaminoimidazole carboxylase [Streptomyces sp. NRRL F...
| 1700 | 0.0e+00 |
| QFZ75959.1 | 5-(carboxyamino)imidazole ribonucleotide synthase [Streptomyces f...
| 1699 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0779 | Seems to have no N-terminal signal seq.
|