| ID | SAVERM_5025
| Type | CDS
|
| From | 6083548
| nt length | 1344
|
| To | 6082205
| aa length | 447
|
| Gene | udgA
| pI | 5.14
|
| Definition | putative UDP-glucose 6-dehydrogenase
| M.W (Da) | 48077
|
| Note | PF03721: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | specific pathways
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3052 putative UDP-glucose 6-dehydrogenase | 823 | 0.0e+00
|
| sgr | SGR_4481 putative UDP-glucose 6-dehydrogenase | 786 | 0.0e+00
|
| sam | SAM23877_3103 UDP-glucose 6-dehydrogenase | 817 | 0.0e+00
|
| scab | SCAB54911 putative UDP-glucose 6-dehydrogenase | 842 | 0.0e+00
|
| sace | SACE_5565 UDP-glucose 6-dehydrogenase protein | 268 | 6.0e-87
|
| nfar | nfa54240 ugd UDP-glucose 6-dehydrogenase | 531 | 4.5e-152
|
| mtub | gi|15607463 PROBABLE UDP-GLUCOSE 6-DEHYDROGENASE UDGA (UDP-GLC DEHYDROGENASE) (UDP-GLCDH) (UDPGDH) [Mycobacterium tuberculosis H37Rv] | 546 | 1.0e-156
|
| cglu | gi|19554038 COG1004:Predicted UDP-glucose 6-dehydrogenase [Corynebacterium glutamicum] | 536 | 9.8e-154
|
| bsub | BG12510 ywqF; similar to NDP-sugar dehydrogenase | 300 | 8.7e-83
|
| paer | PA3559 [gene=PA3559] [prot=probable nucleotide sugar dehydrogenase] [comment=PA3559] | 296 | 1.9e-81
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| UDPG_MGDP_dh_N | 1 | UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain | 4-192 | 197.1 | 1.8e-58
|
| UDPG_MGDP_dh | 1 | UDP-glucose/GDP-mannose dehydrogenase family, central domain | 210-302 | 104.0 | 3.3e-30
|
| UDPG_MGDP_dh_C | 1 | UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain | 328-429 | 85.5 | 2.8e-24
|
| NAD_binding_2 | 1 | NAD binding domain of 6-phosphogluconate dehydrogenase | 4-144 | 24.2 | 2.8e-05
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_148008728.1 | UDP-glucose/GDP-mannose dehydrogenase family protein [Strept...
| 2188 | 0.0e+00 |
| WP_168528450.1 | UDP-glucose/GDP-mannose dehydrogenase family protein [Strept...
| 2185 | 0.0e+00 |
| WP_153290217.1 | UDP-glucose/GDP-mannose dehydrogenase family protein [Strept...
| 2182 | 0.0e+00 |
| WP_067376064.1 | UDP-glucose/GDP-mannose dehydrogenase family protein [Strept...
| 2174 | 0.0e+00 |
| WP_075027361.1 | UDP-glucose/GDP-mannose dehydrogenase family protein [Strept...
| 2173 | 0.0e+00 |
| WP_189192121.1 | UDP-glucose/GDP-mannose dehydrogenase family protein [Strept...
| 2168 | 0.0e+00 |
| WP_099941717.1 | MULTISPECIES: UDP-glucose/GDP-mannose dehydrogenase family p...
| 2168 | 0.0e+00 |
| WP_168492265.1 | MULTISPECIES: UDP-glucose/GDP-mannose dehydrogenase family p...
| 2161 | 0.0e+00 |
| WP_095854278.1 | MULTISPECIES: UDP-glucose/GDP-mannose dehydrogenase family p...
| 2161 | 0.0e+00 |
| WP_054236892.1 | MULTISPECIES: UDP-glucose/GDP-mannose dehydrogenase family p...
| 2159 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0322 | Seems to have no N-terminal signal seq.
|