| ID | SAVERM_5030
| Type | CDS
|
| From | 6089206
| nt length | 1527
|
| To | 6087680
| aa length | 508
|
| Gene |
| pI | 11.19
|
| Definition | putative transcriptional regulator
| M.W (Da) | 55696
|
| Note | PF03816: Cell envelope-related transcriptional attenuator domain
| AseI frg. | I
|
| SignalP v.4.0 | Signal peptide | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3047 putative membrane protein | 678 | 0.0e+00
|
| sgr | SGR_4490 putative transcriptional regulator | 632 | 0.0e+00
|
| sam | SAM23877_3091 Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr | 665 | 0.0e+00
|
| scab | SCAB54961 putative transcriptional regulator | 683 | 0.0e+00
|
| mtub | gi|15607962 hypothetical protein Rv0822c [Mycobacterium tuberculosis H37Rv] | 166 | 2.6e-42
|
| cglu | gi|19551968 COG1316:Transcriptional regulator [Corynebacterium glutamicum] | 149 | 2.3e-37
|
| bsub | BG10404 lytR; attenuator role for lytABC and lytR expression | 97 | 1.3e-21
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| LytR_cpsA_psr | 1 | Cell envelope-related transcriptional attenuator domain | 135-288 | 160.9 | 2.2e-47
|
| LytR_C | 1 | LytR cell envelope-related transcriptional attenuator | 396-480 | 46.4 | 5.6e-12
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2126 | Seems to have no N-terminal signal seq.
|