| ID | SAVERM_5045
| Type | CDS
|
| From | 6110730
| nt length | 573
|
| To | 6110158
| aa length | 190
|
| Gene |
| pI | 6.82
|
| Definition | hypothetical protein
| M.W (Da) | 20454
|
| Note | PF06262: Domain of unknown function (DUF1025)
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3031 hypothetical protein | 157 | 2.0e-50
|
| sgr | SGR_4506 conserved hypothetical protein | 176 | 6.0e-58
|
| sam | SAM23877_3071 hypothetical protein | 201 | 4.0e-68
|
| scab | SCAB55111 hypothetical protein | 251 | 3.0e-87
|
| sace | SACE_6462 hypothetical protein | 63 | 7.0e-14
|
| nfar | nfa46230 hypothetical protein | 79 | 1.5e-16
|
| mtub | gi|15610395 hypothetical protein Rv3259 [Mycobacterium tuberculosis H37Rv] | 80 | 8.7e-17
|
| cglu | gi|19551972 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 49 | 9.0e-08
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Zincin_1 | 1 | Zincin-like metallopeptidase | 126-185 | 33.0 | 4.3e-08
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| QIY67390.1 | metallopeptidase family protein [Streptomyces sp. RPA4-2]
| 567 | 8.3e-72 |
|
| 567 | 1.1e-71 |
| WP_215121011.1 | metallopeptidase family protein [Streptomyces sp. MG62] >gb
| 563 | 1.3e-71 |
| AWW39258.1 | hypothetical protein DN051_23495 [Streptomyces cadmiisoli]
| 566 | 1.4e-71 |
|
| 565 | 1.5e-71 |
| WP_175432914.1 | metallopeptidase family protein [Streptomyces hawaiiensis] >...
| 561 | 2.8e-71 |
| WP_187826111.1 | metallopeptidase family protein [Streptomyces sp. TRM68367] ...
| 560 | 3.5e-71 |
| WP_189726710.1 | metallopeptidase family protein [Streptomyces purpurascens] ...
| 559 | 5.4e-71 |
|
| 557 | 5.9e-71 |
| WP_224734834.1 | metallopeptidase family protein [Streptomyces sp. PSKA30] >l...
| 558 | 6.4e-71 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4345 | Seems to have no N-terminal signal seq.
|