| ID | SAVERM_5046
| Type | CDS
|
| From | 6110912
| nt length | 474
|
| To | 6111385
| aa length | 157
|
| Gene |
| pI | 8.61
|
| Definition | hypothetical protein
| M.W (Da) | 16763
|
| Note | PF12005: Protein of unknown function (DUF3499)
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3030 hypothetical protein | 260 | 1.0e-91
|
| sgr | SGR_4507 conserved hypothetical protein | 212 | 1.0e-72
|
| sam | SAM23877_3070 hypothetical protein | 230 | 6.0e-80
|
| scab | SCAB55121 hypothetical protein | 259 | 3.0e-91
|
| sace | SACE_6461 hypothetical protein | 132 | 3.0e-41
|
| nfar | nfa46240 hypothetical protein | 127 | 4.5e-31
|
| mtub | gi|15610394 hypothetical protein Rv3258c [Mycobacterium tuberculosis H37Rv] | 115 | 1.4e-27
|
| cglu | gi|19551973 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 117 | 2.6e-28
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3499 | 1 | Protein of unknown function (DUF3499) | 38-153 | 158.3 | 1.1e-46
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| RPE43396.1 | uncharacterized protein DUF3499 [Streptomyces sp. Ag109_O5-1]
| 650 | 3.2e-85 |
| GGN37146.1 | hypothetical protein GCM10011578_081120 [Streptomyces fuscichrom...
| 647 | 9.2e-85 |
| EDY61523.1 | conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
| 644 | 1.9e-84 |
| SEF01372.1 | Protein of unknown function [Streptomyces sp. Ag109_O5-10]
| 643 | 5.3e-84 |
| WP_202440101.1 | MULTISPECIES: DUF3499 domain-containing protein [unclassifie...
| 641 | 7.1e-84 |
| WP_089102352.1 | DUF3499 domain-containing protein [Streptomyces hyaluromycin...
| 639 | 1.5e-83 |
| WP_202432387.1 | MULTISPECIES: DUF3499 domain-containing protein [Streptomyce...
| 636 | 3.5e-83 |
| WP_210719600.1 | DUF3499 family protein [Streptomyces galbus]
| 635 | 5.0e-83 |
| SNX61648.1 | uncharacterized protein DUF3499 [Streptomyces sp. TLI_55]
| 637 | 5.3e-83 |
| SEC96278.1 | Protein of unknown function [Streptomyces misionensis]
| 634 | 6.3e-83 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.6000 | Seems to have no N-terminal signal seq.
|