| ID | SAVERM_5055
| Type | CDS
|
| From | 6122654
| nt length | 1008
|
| To | 6121647
| aa length | 335
|
| Gene |
| pI | 9.96
|
| Definition | putative membrane protein
| M.W (Da) | 34361
|
| Note | PF06271: RDD family
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3021 putative integral membrane protein | 382 | 2.0e-134
|
| sgr | SGR_4515 conserved hypothetical protein | 324 | 1.0e-111
|
| sam | SAM23877_3060 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage | 376 | 1.0e-131
|
| scab | SCAB55201 putative membrane protein | 375 | 3.0e-131
|
| nfar | nfa900 hypothetical protein | 196 | 1.8e-51
|
| mtub | gi|15610831 POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 204 | 6.8e-54
|
| bsub | BG11179 yckC; similar to unknown proteins from B. subtilis | 41 | 5.1e-05
|
| paer | PA4318 [gene=PA4318] [prot=hypothetical protein] [comment=PA4318] | 67 | 1.3e-12
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| RDD | 1 | RDD family | 17-144 | 64.1 | 1.4e-17
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4885 | Seems to have no N-terminal signal seq.
|