| ID | SAVERM_5056
| Type | CDS
|
| From | 6122773
| nt length | 1008
|
| To | 6123780
| aa length | 335
|
| Gene |
| pI | 9.32
|
| Definition | putative membrane protein
| M.W (Da) | 35949
|
| Note | PF01944: Integral membrane protein DUF95
| AseI frg. | I
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3020 putative integral membrane protein | 573 | 0.0e+00
|
| sgr | SGR_4516 conserved hypothetical protein | 574 | 0.0e+00
|
| sam | SAM23877_3059 Integral membrane protein | 578 | 0.0e+00
|
| scab | SCAB55211 putative membrane protein | 591 | 0.0e+00
|
| nfar | nfa890 hypothetical protein | 335 | 2.5e-93
|
| mtub | gi|15610830 POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 330 | 8.2e-92
|
| ecoli | gi|16130136 heme export protein (ABC superfamily, membrane) [Escherichia coli K12] | 35 | 5.4e-03
|
| paer | PA4319 [gene=PA4319] [prot=conserved hypothetical protein] [comment=PA4319] | 100 | 1.4e-22
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| SpoIIM | 1 | Stage II sporulation protein M | 111-283 | 126.8 | 6.8e-37
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_059206369.1 | stage II sporulation protein M [Streptomyces canus] >gb
| 1290 | 4.8e-177 |
| WP_057611533.1 | stage II sporulation protein M [Streptomyces sp. Root369] >g...
| 1289 | 8.3e-177 |
| WP_069764089.1 | stage II sporulation protein M [Streptomyces sp. LUP47B]
| 1288 | 1.1e-176 |
| WP_030603779.1 | stage II sporulation protein M [Streptomyces fulvoviolaceus]
| 1288 | 1.2e-176 |
| WP_060901843.1 | MULTISPECIES: stage II sporulation protein M [Streptomyces] ...
| 1286 | 2.6e-176 |
| WP_062043807.1 | stage II sporulation protein M [Streptomyces canus] >gb
| 1284 | 4.3e-176 |
| WP_164430325.1 | stage II sporulation protein M [Streptomyces sp. SID13726] >...
| 1284 | 5.3e-176 |
| QIY96293.1 | stage II sporulation protein M [Streptomyces sp. S1D4-11]
| 1283 | 7.3e-176 |
| WP_095934751.1 | stage II sporulation protein M [Streptomyces sp. Tue6028] >g...
| 1282 | 8.3e-176 |
| WP_075027387.1 | stage II sporulation protein M [Streptomyces mirabilis] >emb...
| 1282 | 1.1e-175 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4843 | Seems to have no N-terminal signal seq.
|