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IDSAVERM_5061 TypeCDS
From6135261 nt length1350
To6133912 aa length449
Gene pI6.8
Definitionputative integral membrane protein M.W (Da)45364
NotePF07415: Gammaherpesvirus latent membrane protein (LMP2) protein AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3015 putative integral membrane protein4241.0e-146
sgrSGR_4521 putative integral membrane protein3107.0e-103
samSAM23877_3053 putative integral membrane protein3944.0e-135
mtubgi|15610825 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv]1871.2e-48
ecoligi|16129216 hypothetical protein b1255 [Escherichia coli K12]395.3e-04

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GPDPase_memb1Membrane domain of glycerophosphoryl diester phosphodiesterase290-36530.11.9e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_151484347.1 hypothetical protein [Streptomyces albicerus] 7256.7e-88
WP_189779401.1 glycerophosphoryl diester phosphodiesterase membrane domain-... 7161.5e-86
WP_107015868.1 glycerophosphoryl diester phosphodiesterase membrane domain-... 7134.7e-86
WP_210882129.1 glycerophosphoryl diester phosphodiesterase membrane domain-... 7125.2e-86
WP_138051087.1 hypothetical protein [Streptomyces montanus] >lcl 7119.1e-86
WP_055618097.1 glycerophosphoryl diester phosphodiesterase membrane domain-... 7022.2e-85
WP_165342517.1 hypothetical protein [Streptomyces ureilyticus] >gb 7031.3e-84
WP_033326569.1 glycerophosphoryl diester phosphodiesterase membrane domain-... 7021.7e-84
WP_099504248.1 MULTISPECIES: hypothetical protein [Streptomyces] >gb 7032.0e-84
EPJ42535.1 hypothetical protein STAFG_0407 [Streptomyces afghaniensis 772] 6883.1e-84

PSORT result

LocalizationCertaintyPSORT said
membrane0.5034 Seems to have no N-terminal signal seq.