| ID | SAVERM_5063
| Type | CDS
|
| From | 6136558
| nt length | 690
|
| To | 6137247
| aa length | 229
|
| Gene | mtrA
| pI | 5.83
|
| Definition | putative two-component system response regulator
| M.W (Da) | 25248
|
| Note | probably essential TCR, PF00072: Response regulator receiver domain
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3013 putative two-component system response regulator | 449 | 8.0e-164
|
| sgr | SGR_4523 putative two-component system response regulator | 446 | 2.0e-162
|
| sam | SAM23877_3051 DNA-binding response regulator MtrA | 440 | 3.0e-160
|
| scab | SCAB55281 putative two-component system response regulator | 445 | 4.0e-162
|
| sace | SACE_6447 two-component response regulator | 345 | 9.0e-123
|
| nfar | nfa46110 two-component system response regulator | 358 | 1.7e-100
|
| mtub | gi|15610382 TWO COMPONENT SENSORY TRANSDUCTION TRANSCRIPTIONAL REGULATORY PROTEIN MTRA [Mycobacterium tuberculosis H37Rv] | 343 | 5.6e-96
|
| cglu | gi|19551981 COG0745:Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Corynebacterium glutamicum] | 305 | 1.2e-84
|
| ecoli | gi|16130019 response regulator in two-component regulatory system with BaeS (OmpR family) [Escherichia coli K12] | 170 | 6.4e-44
|
| paer | PA1157 [gene=PA1157] [prot=probable two-component response regulator] [comment=PA1157] | 182 | 1.7e-47
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Response_reg | 1 | Response regulator receiver domain | 9-118 | 101.1 | 3.6e-29
|
| Trans_reg_C | 1 | Transcriptional regulatory protein, C terminal | 150-225 | 89.7 | 8.8e-26
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_187284748.1 | MULTISPECIES: two-component system response regulator MtrA [...
| 1161 | 9.2e-161 |
| WP_187279108.1 | MULTISPECIES: two-component system response regulator MtrA [...
| 1159 | 1.8e-160 |
| WP_199812060.1 | MULTISPECIES: MtrAB system response regulator MtrA [Streptom...
| 1158 | 2.5e-160 |
| WP_187283109.1 | MULTISPECIES: two-component system response regulator MtrA [...
| 1158 | 2.5e-160 |
| WP_003990656.1 | MULTISPECIES: two-component system response regulator MtrA [...
| 1158 | 2.6e-160 |
| WP_015659998.1 | MULTISPECIES: two-component system response regulator MtrA [...
| 1158 | 2.6e-160 |
| WP_189148219.1 | MULTISPECIES: two-component system response regulator MtrA [...
| 1158 | 2.7e-160 |
| WP_016438163.1 | MULTISPECIES: two-component system response regulator MtrA [...
| 1157 | 3.5e-160 |
| WP_191870552.1 | MULTISPECIES: two-component system response regulator MtrA [...
| 1156 | 3.8e-160 |
| WP_194238626.1 | two-component system response regulator MtrA [Streptomyces s...
| 1156 | 4.0e-160 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0862 | Seems to have no N-terminal signal seq.
|