| ID | SAVERM_5066
| Type | CDS
|
| From | 6141156
| nt length | 1020
|
| To | 6142175
| aa length | 339
|
| Gene |
| pI | 10.95
|
| Definition | hypothetical protein
| M.W (Da) | 35026
|
| Note | PF00156: Phosphoribosyl transferase domain
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO3010 hypothetical protein | 281 | 2.0e-94
|
| sgr | SGR_4526 conserved hypothetical protein | 182 | 1.0e-56
|
| sam | SAM23877_3048 hypothetical protein | 266 | 1.0e-88
|
| scab | SCAB55321 hypothetical protein | 297 | 4.0e-101
|
| nfar | nfa46080 hypothetical protein | 129 | 2.8e-31
|
| mtub | gi|15610378 hypothetical protein Rv3242c [Mycobacterium tuberculosis H37Rv] | 111 | 7.9e-26
|
| bsub | BG10397 comFC, comF3; late competence gene | 30 | 1.6e-01
|
| ecoli | gi|16131289 putative periplasmic gluconate-binding protein in GNT I transport system [Escherichia coli K12] | 36 | 3.2e-03
|
| paer | PA0489 [gene=PA0489] [prot=probable phosphoribosyl transferase] [comment=PA0489] | 45 | 5.6e-06
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
no hits.
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| GAX55438.1 | hypothetical protein SO3561_06995 [Streptomyces olivochromogenes...
| 481 | 1.4e-54 |
| GGJ34664.1 | hypothetical protein GCM10012282_34300 [Streptomyces lacrimiflum...
| 475 | 1.0e-53 |
| SFF52692.1 | Predicted amidophosphoribosyltransferases [Streptomyces mirabili...
| 471 | 4.8e-53 |
| SOE74231.1 | Predicted amidophosphoribosyltransferases [Streptomyces sp. OV19...
| 457 | 8.4e-51 |
| PBC98544.1 | putative amidophosphoribosyltransferase [Streptomyces sp. Ag82_O1...
| 453 | 3.3e-50 |
| WP_143632778.1 | ComF family protein [Streptomyces sp. IB201691-2A2] >lcl
| 422 | 3.5e-46 |
| WP_067380064.1 | ComF family protein [Streptomyces olivochromogenes] >gb
| 421 | 7.2e-46 |
| GGX48712.1 | hypothetical protein GCM10010321_77150 [Streptomyces chartreusis...
| 426 | 1.6e-45 |
| WP_143626870.1 | MULTISPECIES: ComF family protein [unclassified Streptomyces...
| 419 | 1.6e-45 |
| GGX90261.1 | hypothetical protein GCM10010515_66890 [Streptomyces fructoferme...
| 425 | 1.7e-45 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2274 | Seems to have no N-terminal signal seq.
|