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IDSAVERM_5124 TypeCDS
From6221799 nt length819
To6222617 aa length272
Gene pI6.52
Definitionputative membrane protein M.W (Da)28459
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2953 putative membrane protein3525.0e-124
samSAM23877_2990 hypothetical protein3557.0e-125
scabSCAB55911 hypothetical protein3603.0e-127
cglugi|19552113 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum]315.5e-02
bsubBG12541 yxkC; extracellular protein316.9e-02

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

zf-HC21Putative zinc-finger27-5732.09.8e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_199836120.1 zf-HC2 domain-containing protein [Streptomyces sp. TP-A0356] 11049.9e-151
WP_028804710.1 zf-HC2 domain-containing protein [Streptomyces sp. 142MFCol3... 10821.7e-147
WP_095934667.1 zf-HC2 domain-containing protein [Streptomyces sp. Tue6028] 10822.3e-147
WP_205523158.1 zf-HC2 domain-containing protein [Streptomyces sp. RLB3-17] 10803.1e-147
QDO40451.1 RNA polymerase subunit sigma [Streptomyces sp. RLB3-17] 10813.4e-147
KPI17426.1 hypothetical protein OK006_2431 [Actinobacteria bacterium OK006] ... 10795.3e-147
WP_079090357.1 MULTISPECIES: zf-HC2 domain-containing protein [unclassified... 10805.4e-147
GHD73635.1 RNA polymerase subunit sigma [Streptomyces mirabilis] 10721.0e-145
WP_180292980.1 MULTISPECIES: zf-HC2 domain-containing protein [Streptomyces... 10701.2e-145
QIY96222.1 zf-HC2 domain-containing protein [Streptomyces sp. S1D4-11] 10701.2e-145

PSORT result

LocalizationCertaintyPSORT said
membrane0.3399 Seems to have no N-terminal signal seq.