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IDSAVERM_5127 TypeCDS
From6227508 nt length282
To6227789 aa length93
Genehup pI10.15
Definitionputative DNA-binding protein Hu 1 M.W (Da)9837
NotePF00216: Bacterial DNA-binding protein AseI frg.B
SignalP v.4.0Non-secretory protein | plot CategoryDNA packaging & segregation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2950 hup DNA binding protein Hu (hs1)1792.0e-61
sgrSGR_4582 putative DNA-binding protein Hu 11622.0e-54
samSAM23877_2987 DNA-binding protein HU 11787.0e-61
scabSCAB55941 putative DNA-binding protein Hu 11822.0e-62
paerPA5348 [gene=PA5348] [prot=probable DNA-binding protein] [comment=PA5348]702.2e-14

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Bac_DNA_binding1Bacterial DNA-binding protein1-9096.48.1e-28

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_007382399.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4715.1e-60
GGX48383.1 DNA-binding protein HU 1 [Streptomyces chartreusis] 4717.9e-60
WP_007498188.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4698.5e-60
GHH24603.1 DNA-binding protein HU 1 [Streptomyces lanatus] 4718.6e-60
WP_148008648.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4681.1e-59
WP_054220032.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4681.5e-59
WP_128378818.1 HU family DNA-binding protein [Streptomyces cavernae] 4671.9e-59
WP_006139383.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4672.2e-59
WP_189216727.1 HU family DNA-binding protein [Streptomyces ruber] >dbj 4672.3e-59
WP_103549419.1 HU family DNA-binding protein [Streptomyces populi] >gb 4672.3e-59

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1594 Seems to have no N-terminal signal seq.