| ID | SAVERM_5130
| Type | CDS
|
| From | 6230197
| nt length | 297
|
| To | 6230493
| aa length | 98
|
| Gene |
| pI | 6.77
|
| Definition | hypothetical protein
| M.W (Da) | 10544
|
| Note | PF11238: Protein of unknown function (DUF3039)
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2947 hypothetical protein | 164 | 5.0e-55
|
| sgr | SGR_4587 conserved hypothetical protein | 156 | 5.0e-52
|
| sam | SAM23877_2984 hypothetical protein | 165 | 1.0e-55
|
| scab | SCAB55971 hypothetical protein | 161 | 5.0e-54
|
| sace | SACE_1793 hypothetical protein | 65 | 2.0e-16
|
| nfar | nfa37710 hypothetical protein | 72 | 7.0e-15
|
| mtub | gi|15609845 hypothetical protein Rv2708c [Mycobacterium tuberculosis H37Rv] | 60 | 1.6e-11
|
| cglu | gi|19553119 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 52 | 2.3e-09
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3039 | 1 | Protein of unknown function (DUF3039) | 30-85 | 111.6 | 1e-32
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_079085174.1 | DUF3039 domain-containing protein [Streptomyces dysideae]
| 463 | 1.4e-58 |
| Q... |
| 462 | 1.5e-58 |
| WP_075029065.1 | MULTISPECIES: DUF3039 domain-containing protein [Streptomyce...
| 462 | 1.7e-58 |
| WP_028804715.1 | MULTISPECIES: DUF3039 domain-containing protein [unclassifie...
| 462 | 1.9e-58 |
| WP_210580022.1 | DUF3039 domain-containing protein [Streptomyces sp. GESEQ-4]
| 462 | 2.0e-58 |
| WP_128428826.1 | DUF3039 domain-containing protein [Streptomyces cyaneus]
| 462 | 2.0e-58 |
| WP_046259009.1 | DUF3039 domain-containing protein [Streptomyces sp. WM6386] ...
| 461 | 2.4e-58 |
| GGN53221.1 | hypothetical protein GCM10011579_011150 [Streptomyces albiflaves...
| 462 | 2.7e-58 |
| WP_037619252.1 | DUF3039 domain-containing protein [Streptomyces aureus]
| 460 | 3.6e-58 |
| WP_067433594.1 | DUF3039 domain-containing protein [Streptomyces lincolnensis...
| 460 | 3.7e-58 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2535 | Seems to have no N-terminal signal seq.
|