| ID | SAVERM_5145
| Type | CDS
|
| From | 6251031
| nt length | 831
|
| To | 6250201
| aa length | 276
|
| Gene | opuBB1
| pI | 10.77
|
| Definition | putative ABC transporter permease protein
| M.W (Da) | 29041
|
| Note | osmoprotectant transport system permease protein, PF00528: Binding-protein-dependent transport system inner membrane component
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2932 putative permease inner membrane component | 387 | 1.0e-137
|
| sgr | SGR_4608 putative ABC transporter permease protein | 281 | 9.0e-96
|
| sam | SAM23877_2969 ProWL | 384 | 5.0e-136
|
| sace | SACE_0079 probable ABC quaternary amine transporter,permease component | 182 | 2.0e-57
|
| nfar | nfa32510 ABC transporter permease | 221 | 5.4e-59
|
| bsub | BG12634 opuBB, proW; glycine betaine/proline/choline transport system permease protein | 143 | 9.7e-36
|
| ecoli | gi|16130066 putative glycine/betaine/choline transport protein, osmoprotection (ABC superfamily, membrane) [Escherichia coli K12] | 136 | 1.7e-33
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| BPD_transp_1 | 1 | Binding-protein-dependent transport system inner membrane component | 97-262 | 67.0 | 1.7e-18
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.5012 | Seems to have no N-terminal signal seq.
|