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IDSAVERM_5180 TypeCDS
From6286890 nt length801
To6287690 aa length266
Gene pI8.39
Definitionhypothetical protein M.W (Da)28483
NotePF06182: Protein of unknown function (DUF990) AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2896 putative integral membrane protein3452.0e-121
sgrSGR_4648 conserved hypothetical protein3775.0e-134
samSAM23877_2930 putative integral membrane protein3903.0e-139
scabSCAB56811 hypothetical protein4041.0e-144
nfarnfa21700 hypothetical protein1747.2e-45

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane_61ABC-2 family transporter protein43-26160.91.4e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202498384.1 ABC-2 family transporter protein [Streptomyces sp. SID5469] 11366.7e-156
WP_171114100.1 MULTISPECIES: ABC-2 family transporter protein [unclassified... 9804.1e-132
WP_086722470.1 ABC-2 family transporter protein [Streptomyces carpinensis] 9781.0e-131
WP_030167402.1 ABC-2 family transporter protein [Streptomyces sp. NRRL S-81... 9771.3e-131
WP_189147863.1 ABC-2 family transporter protein [Streptomyces lacrimiflumin... 9752.4e-131
WP_189906608.1 ABC-2 family transporter protein [Streptomyces spiralis] >db... 9752.9e-131
WP_189184791.1 ABC-2 family transporter protein [Streptomyces albiflavescen... 9735.2e-131
WP_218516761.1 ABC-2 family transporter protein [Streptomyces sp. TRM70350]... 9701.9e-130
WP_189699099.1 ABC-2 family transporter protein [Streptomyces chromofuscus]... 9683.8e-130
NED75675.1 ABC transporter permease [Streptomyces sp. SID9944] 9658.7e-130

PSORT result

LocalizationCertaintyPSORT said
membrane0.5055 Seems to have no N-terminal signal seq.