| ID | SAVERM_5183
| Type | CDS
|
| From | 6289626
| nt length | 903
|
| To | 6290528
| aa length | 300
|
| Gene |
| pI | 6.21
|
| Definition | hypothetical protein
| M.W (Da) | 34105
|
| Note | PF08044: Domain of unknown function (DUF1707)
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2893 hypothetical protein | 337 | 2.0e-117
|
| sgr | SGR_4651 conserved hypothetical protein | 240 | 8.0e-80
|
| sam | SAM23877_2927 hypothetical protein | 377 | 2.0e-133
|
| scab | SCAB56841 hypothetical protein | 313 | 7.0e-108
|
| sace | SACE_2287 hypothetical protein | 117 | 1.0e-32
|
| nfar | nfa54900 hypothetical protein | 74 | 1.2e-14
|
| mtub | gi|57116804 hypothetical protein Rv0966c [Mycobacterium tuberculosis H37Rv] | 147 | 6.5e-37
|
| cglu | gi|19551735 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 122 | 2.7e-29
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF1707 | 1 | Domain of unknown function (DUF1707) | 9-61 | 83.1 | 9.6e-24
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_099505318.1 | MULTISPECIES: DUF1707 domain-containing protein [Streptomyce...
| 793 | 9.7e-103 |
| WP_189184793.1 | DUF1707 domain-containing protein [Streptomyces albiflavesce...
| 791 | 2.2e-102 |
| WP_055495266.1 | DUF1707 and DUF2154 domain-containing protein [Streptomyces ...
| 783 | 4.7e-101 |
| WP_164370694.1 | DUF1707 and DUF2154 domain-containing protein [Streptomyces ...
| 776 | 4.1e-100 |
| WP_081217491.1 | DUF1707 and DUF2154 domain-containing protein [Streptomyces ...
| 769 | 5.8e-99 |
| WP_095754589.1 | DUF1707 and DUF2154 domain-containing protein [Streptomyces ...
| 765 | 1.4e-98 |
| WP_043679540.1 | DUF1707 and DUF2154 domain-containing protein [Streptomyces ...
| 765 | 1.4e-98 |
| WP_190178322.1 | DUF1707 and DUF2154 domain-containing protein [Streptomyces ...
| 760 | 3.1e-98 |
| WP_234518529.1 | DUF1707 domain-containing protein [Streptomyces glomeratus] ...
| 765 | 3.6e-98 |
| WP_151470888.1 | DUF1707 and DUF2154 domain-containing protein [Streptomyces ...
| 761 | 4.9e-98 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2211 | Seems to have no N-terminal signal seq.
|