| ID | SAVERM_5185
| Type | CDS
|
| From | 6292063
| nt length | 1368
|
| To | 6293430
| aa length | 455
|
| Gene |
| pI | 8.44
|
| Definition | hypothetical protein
| M.W (Da) | 49634
|
| Note | PF04286: Protein of unknown function (DUF445)
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| sgr | SGR_4653 conserved hypothetical protein | 692 | 0.0e+00
|
| sam | SAM23877_2925 hypothetical protein | 733 | 0.0e+00
|
| scab | SCAB56871 hypothetical protein | 722 | 0.0e+00
|
| sace | SACE_6994 possible membrane protein | 477 | 3.0e-168
|
| nfar | nfa52100 hypothetical protein | 409 | 2.6e-115
|
| mtub | gi|15607614 POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 380 | 7.7e-107
|
| cglu | gi|19551622 COG2733:Uncharacterized membrane protein [Corynebacterium glutamicum] | 316 | 1.6e-87
|
| bsub | BG13034 yheB; hypothetical protein | 31 | 1.0e-01
|
| ecoli | gi|16132157 putative transmembrane protein [Escherichia coli K12] | 183 | 1.8e-47
|
*sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF445 | 1 | Protein of unknown function (DUF445) | 90-452 | 341.3 | 1.1e-101
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| GGN53583.1 | membrane protein [Streptomyces albiflavescens]
| 1958 | 0.0e+00 |
| WP_075029117.1 | DUF445 domain-containing protein [Streptomyces mirabilis] >e...
| 1949 | 0.0e+00 |
| WP_190173113.1 | MULTISPECIES: DUF445 domain-containing protein [Streptomyces...
| 1943 | 0.0e+00 |
| WP_067379701.1 | DUF445 domain-containing protein [Streptomyces olivochromoge...
| 1940 | 0.0e+00 |
| WP_095854417.1 | MULTISPECIES: DUF445 domain-containing protein [unclassified...
| 1940 | 0.0e+00 |
| WP_168491990.1 | MULTISPECIES: DUF445 domain-containing protein [Streptomyces...
| 1940 | 0.0e+00 |
| WP_194075655.1 | DUF445 domain-containing protein [Streptomyces justiciae] >l...
| 1937 | 0.0e+00 |
| WP_003990528.1 | DUF445 domain-containing protein [Streptomyces viridochromog...
| 1935 | 0.0e+00 |
| WP_169081050.1 | MULTISPECIES: DUF445 domain-containing protein [unclassified...
| 1931 | 0.0e+00 |
| WP_181651185.1 | DUF445 domain-containing protein [Streptomyces sp. WAC00263]
| 1931 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.3612 | Seems to have no N-terminal signal seq.
|