-- | --

IDSAVERM_5190 TypeCDS
From6296882 nt length1026
To6297907 aa length341
GenebdpF pI6.6
Definitionputative AraC-family transcriptional regulator M.W (Da)36041
NotePF01965: DJ-1/PfpI family, PF00165: Bacterial regulatory helix-turn-helix proteins, AraC family AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryregulation


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0605 putative araC-family transcriptional regulator4484.0e-160
samSAM23877_7363 putative AraC-family transcriptional regulator4362.0e-155
scabSCAB56921 putative AraC-family transcriptional regulator5370.0e+00
saceSACE_4268 AraC-family transcriptional regulator4743.0e-170
nfarnfa23030 transcriptional regulator4245.5e-120

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain233-31182.71.6e-23

HTH_AraC2Bacterial regulatory helix-turn-helix proteins, AraC family220-261, 274-31181.82e-23

DJ-1_PfpI1DJ-1/PfpI family3-17153.42.4e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_235613756.1 helix-turn-helix domain-containing protein [Streptomyces oli... 15150.0e+00
WP_095854421.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15130.0e+00
WP_217566687.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15110.0e+00
WP_225900318.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15100.0e+00
WP_181651186.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15100.0e+00
WP_099922450.1 helix-turn-helix domain-containing protein [Streptomyces mir... 15090.0e+00
WP_097284891.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 15090.0e+00
WP_097225739.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15080.0e+00
WP_189184800.1 helix-turn-helix domain-containing protein [Streptomyces alb... 15060.0e+00
GGN53604.1 AraC family transcriptional regulator [Streptomyces albiflavesce... 15020.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.3293 Seems to have no N-terminal signal seq.