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IDSAVERM_5197 TypeCDS
From6301736 nt length852
To6302587 aa length283
Gene pI7.05
Definitionputative DNA-binding protein M.W (Da)31474
NotePF01381: Helix-turn-helix AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2869 putative regulatory protein2632.0e-88
sgrSGR_7135t putative DNA-binding protein1775.0e-55
scabSCAB48061 putative DNA-binding protein4449.0e-160
nfarnfa38780 DNA-binding protein2184.7e-58
cglugi|19553021 COG1396:Predicted transcriptional regulators [Corynebacterium glutamicum]339.0e-03

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain17-7049.05.2e-13

HTH_31Helix-turn-helix20-6726.83.6e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_181651198.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 13120.0e+00
WP_143605078.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 11345.6e-155
WP_152168514.1 helix-turn-helix domain-containing protein [Streptomyces pha... 11285.4e-154
WP_055698462.1 helix-turn-helix domain-containing protein [Streptomyces sil... 11138.6e-152
WP_210525017.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 11094.6e-151
WP_142264516.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11085.6e-151
WP_171397520.1 helix-turn-helix domain-containing protein [Streptomyces aso... 10991.4e-149
WP_215456217.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 10991.4e-149
WP_129294668.1 helix-turn-helix transcriptional regulator [Streptomyces lyd... 10921.6e-148
WP_013002445.1 helix-turn-helix domain-containing protein [Streptomyces sca... 10921.8e-148

PSORT result

LocalizationCertaintyPSORT said
membrane0.1277 Seems to have no N-terminal signal seq.