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IDSAVERM_5229 TypeCDS
From6338409 nt length750
To6337660 aa length249
GenegltKA1 pI10.66
Definitionputative polar amino acid ABC transporter substrate-binding protein M.W (Da)26649
NotePF00528: Binding-protein-dependent transport system inner membrane component AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2829 probable amino acid ABC transporter protein integral membrane component.3068.0e-107
sgrSGR_4712 putative amino acid ABC transporter permease protein1774.0e-56
samSAM23877_2876 putative amino-acid ABC transporter permease protein y4tF3061.0e-106
scabSCAB57451 putative polar amino acid ABC transporter substrate-binding protein3682.0e-130
saceSACE_6268 putative amino acid ABC transporter permease1861.0e-59
ecoligi|16128778 glutamine ABC transporter permease component [Escherichia coli K12]1253.5e-30
paerPA5154 [gene=PA5154] [prot=probable permease of ABC transporter] [comment=PA5154]1231.4e-29

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component35-21360.12.1e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_167993984.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 10502.6e-143
WP_095755857.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 10096.1e-137
WP_164333164.1 MULTISPECIES: ectoine/hydroxyectoine ABC transporter permeas... 9991.8e-135
WP_192232996.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 9982.4e-135
WP_205077585.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 9982.6e-135
WP_124441983.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 9941.2e-134
WP_189784051.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 9951.6e-134
WP_149830963.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 9923.1e-134
WP_067388445.1 MULTISPECIES: ectoine/hydroxyectoine ABC transporter permeas... 9852.2e-133
WP_111005886.1 ectoine/hydroxyectoine ABC transporter permease subunit EhuC... 9522.6e-128

PSORT result

LocalizationCertaintyPSORT said
membrane0.4163 Seems to have no N-terminal signal seq.