| ID | SAVERM_5241
| Type | CDS
|
| From | 6352318
| nt length | 1320
|
| To | 6350999
| aa length | 439
|
| Gene |
| pI | 6.35
|
| Definition | hypothetical protein
| M.W (Da) | 46562
|
| Note | PF00270: DEAD/DEAH box helicase
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2810 hypothetical protein | 677 | 0.0e+00
|
| sgr | SGR_4721 conserved hypothetical protein | 737 | 0.0e+00
|
| sam | SAM23877_2847 hypothetical protein | 688 | 0.0e+00
|
| scab | SCAB57541 hypothetical protein | 728 | 0.0e+00
|
| nfar | nfa46840 hypothetical protein | 42 | 8.1e-05
|
| mtub | gi|15608391 hypothetical protein Rv1251c [Mycobacterium tuberculosis H37Rv] | 67 | 1.8e-12
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| AAA_30 | 1 | AAA domain | 30-185 | 35.9 | 5.5e-09
|
| AAA_12 | 1 | AAA domain | 294-409 | 29.5 | 4.9e-07
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3393 | Seems to have no N-terminal signal seq.
|