| ID | SAVERM_5272 | Type | CDS |
| From | 6388216 | nt length | 1443 |
| To | 6386774 | aa length | 480 |
| Gene | sidD | pI | 5.45 |
| Definition | lysine decarboxylase | M.W (Da) | 52558 |
| Note | nocardamin biosynthesis, PF00282: Pyridoxal-dependent decarboxylase conserved domain, putative IdeR-binding site: TTAGGCTAGCCTAACCTAA(6388296:6388314) | AseI frg. | B |
| SignalP v.4.0 | Non-secretory protein | plot | Category | antibiotic production |
| Bacteria* | Reciprocally best hit to | Score | E-value |
| coel | SCO2782 lysine decarboxylase | 878 | 0.0e+00 |
| sgr | SGR_4750 putative pyridoxal-dependent decarboxylase | 794 | 0.0e+00 |
| sam | SAM23877_2817 putative L-lysine decarboxylase | 891 | 0.0e+00 |
| scab | SCAB57951 putative lysine decarboxylase | 872 | 0.0e+00 |
| sace | SACE_2888 aromatic-L-amino-acid decarboxylase | 199 | 5.0e-59 |
| Model | No. | Description | Position (aa) | Score | E-value | |
| Pyridoxal_deC | 1 | Pyridoxal-dependent decarboxylase conserved domain | 62-402 | 209.1 | 7.3e-62 | |
| Aminotran_5 | 1 | Aminotransferase class-V | 142-265 | 24.1 | 1.4e-05 | |
| SepSecS | 1 | O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS | 177-314 | 22.3 | 4.2e-05 |
| ID | Description | Score | E-value |
| WP_153290446.1 | lysine decarboxylase DesA [Streptomyces fagopyri] >gb | 2390 | 0.0e+00 |
| WP_075029212.1 | lysine decarboxylase DesA [Streptomyces mirabilis] >emb | 2384 | 0.0e+00 |
| WP_144315501.1 | lysine decarboxylase DesA [Streptomyces sp. RLB3-17] >gb | 2383 | 0.0e+00 |
| WP_143613443.1 | MULTISPECIES: lysine decarboxylase DesA [unclassified Strept... | 2382 | 0.0e+00 |
| WP_097284836.1 | lysine decarboxylase DesA [Streptomyces sp. OK228] >emb | 2381 | 0.0e+00 |
| WP_055615703.1 | lysine decarboxylase DesA [Streptomyces phaeochromogenes] | 2380 | 0.0e+00 |
| WP_189184889.1 | lysine decarboxylase DesA [Streptomyces albiflavescens] >dbj... | 2380 | 0.0e+00 |
| WP_181651244.1 | lysine decarboxylase DesA [Streptomyces sp. WAC00263] >lcl | 2377 | 0.0e+00 |
| WP_067380901.1 | lysine decarboxylase DesA [Streptomyces olivochromogenes] >g... | 2376 | 0.0e+00 |
| WP_143601723.1 | MULTISPECIES: lysine decarboxylase DesA [unclassified Strept... | 2376 | 0.0e+00 |
| Localization | Certainty | PSORT said |
| membrane | 0.2466 | Seems to have no N-terminal signal seq. |