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IDSAVERM_5295 TypeCDS
From6417206 nt length801
To6416406 aa length266
Gene pI6.1
Definitionputative DNA-binding protein M.W (Da)29561
NotePF01381: Helix-turn-helix AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_4775 putative DNA-binding protein3591.0e-126
bsubBG11257 yqaF; unknown385.4e-04

*sgr, Streptomyces griseus IFO13350; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain8-6049.34.4e-13

HTH_31Helix-turn-helix11-6047.99.4e-13

HTH_191Helix-turn-helix domain8-5932.84.7e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_212727388.1 helix-turn-helix domain-containing protein [Streptomyces mir... 11941.1e-164
WP_168491786.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 11889.3e-164
WP_217133271.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11541.5e-158
WP_095854521.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 11411.6e-156
WP_184765092.1 helix-turn-helix transcriptional regulator [Streptomyces alb... 11366.9e-156
WP_107016105.1 helix-turn-helix transcriptional regulator [Streptomyces dio... 11262.3e-154
WP_217165949.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11238.6e-154
11211.7e-153
WP_055573404.1 helix-turn-helix transcriptional regulator [Streptomyces pra... 11192.9e-153
WP_127893810.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 11193.2e-153

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3893 Seems to have no N-terminal signal seq.