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IDSAVERM_53 TypeCDS
From63529 nt length873
To64401 aa length290
Gene pI9.2
Definitionputative XRE-family transcriptional regulator M.W (Da)32895
NotePF13560: Helix-turn-helix domain AseI frg.Y
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_4284 Transcriptional regulatory protein4398.0e-158

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain13-7155.83.9e-15

HTH_31Helix-turn-helix18-6837.31.9e-09

HTH_191Helix-turn-helix domain17-6831.41.3e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202497578.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 14170.0e+00
WP_215138308.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11383.9e-155
WP_086752356.1 helix-turn-helix domain-containing protein [Streptomyces sca... 11234.7e-153
WP_046702536.1 helix-turn-helix domain-containing protein [Streptomyces eur... 11192.3e-152
WP_037697554.1 helix-turn-helix domain-containing protein [Streptomyces sca... 11174.3e-152
WP_093868135.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11165.0e-152
WP_143634206.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11165.6e-152
WP_123973452.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11052.7e-150
WP_093695008.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11039.4e-150
WP_138903022.1 helix-turn-helix domain-containing protein [Streptomyces alb... 11003.3e-149

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3933 Seems to have no N-terminal signal seq.