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IDSAVERM_5312 TypeCDS
From6439552 nt length1041
To6438512 aa length346
Gene pI6.38
Definitionputative LacI-family transcriptional regulator M.W (Da)36030
NotePF00532: Periplasmic binding proteins and sugar binding domain of the LacI family AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2753 putative LacI-family transcriptional regulator5880.0e+00
sgrSGR_4812 putative LacI-family transcriptional regulator5650.0e+00
samSAM23877_2779 LacI family transcriptional regulator5750.0e+00
scabSCAB58371 putative LacI-family transcriptional regulator5980.0e+00
saceSACE_4828 putative LacI-family transcriptional regulator3441.0e-118
nfarnfa27550 transcriptional regulator1656.2e-42

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_31Periplasmic binding protein-like domain182-341115.13.4e-33

Peripla_BP_11Periplasmic binding proteins and sugar binding domain of LacI family62-29092.72.5e-26

LacI1Bacterial regulatory proteins, lacI family4-4959.51.9e-16

Peripla_BP_41Periplasmic binding protein domain137-29652.93.6e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_200417516.1 LacI family transcriptional regulator [Streptomyces sp. Y2F8... 15080.0e+00
WP_095934486.1 LacI family transcriptional regulator [Streptomyces sp. Tue6... 15040.0e+00
WP_196462600.1 LacI family transcriptional regulator [Streptomyces spinover... 15020.0e+00
WP_055490103.1 LacI family transcriptional regulator [Streptomyces sp. TP-A... 15010.0e+00
WP_037619015.1 LacI family transcriptional regulator [Streptomyces aureus] 15010.0e+00
WP_103838708.1 LacI family transcriptional regulator [Streptomyces sp. Ru72... 15000.0e+00
WP_149827546.1 LacI family transcriptional regulator [Streptomyces tailanen... 15000.0e+00
WP_151474357.1 LacI family transcriptional regulator [Streptomyces triticir... 15000.0e+00
WP_171113955.1 MULTISPECIES: LacI family transcriptional regulator [Strepto... 14980.0e+00
WP_028803546.1 LacI family transcriptional regulator [Streptomyces sp. 142M... 14960.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1065 Seems to have no N-terminal signal seq.