| ID | SAVERM_5330
| Type | CDS
|
| From | 6458679
| nt length | 1290
|
| To | 6459968
| aa length | 429
|
| Gene | citA1
| pI | 6.1
|
| Definition | putative citrate synthase
| M.W (Da) | 47873
|
| Note | PF00285: Citrate synthase
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | TCA cycle
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2736 citrate synthase. | 843 | 0.0e+00
|
| sgr | SGR_4826 putative citrate synthase | 838 | 0.0e+00
|
| sam | SAM23877_2765 citrate synthase | 846 | 0.0e+00
|
| scab | SCAB58791 putative citrate synthase | 855 | 0.0e+00
|
| sace | SACE_0649 citrate synthase | 628 | 0.0e+00
|
| nfar | nfa6580 gltA citrate synthase | 587 | 5.0e-169
|
| mtub | gi|15608036 citrate synthase [Mycobacterium tuberculosis H37Rv] | 596 | 8.3e-172
|
| cglu | gi|19552056 COG0372:Citrate synthase [Corynebacterium glutamicum] | 548 | 1.4e-157
|
| ecoli | gi|16128695 citrate synthase [Escherichia coli K12] | 452 | 2.5e-128
|
| paer | PA1580 [gene=gltA] [prot=citrate synthase] [comment=PA1580] | 468 | 4.7e-133
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Citrate_synt | 1 | Citrate synthase, C-terminal domain | 46-412 | 451.0 | 2.7e-135
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3036 | Seems to have no N-terminal signal seq.
|