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IDSAVERM_5345 TypeCDS
From6480520 nt length864
To6481383 aa length287
Gene pI10.28
Definitionputative ABC transporter permease protein M.W (Da)30243
NoteTat substrate, PF04544: Herpesvirus egress protein UL20 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2722 putative integral membrane protein4787.0e-173
sgrSGR_4844 putative ABC transporter permease protein4074.0e-145
samSAM23877_2752 conserved membrane protein of unknown function4532.0e-163
scabSCAB58951 putative ABC transporter permease protein4282.0e-153
saceSACE_5400 putative integral membrane protein1892.0e-59

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane_21ABC-2 family transporter protein24-28547.71.1e-12

ABC2_membrane_41ABC-2 family transporter protein24-18942.75.3e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189184955.1 ABC transporter permease [Streptomyces albiflavescens] >dbj 10435.9e-141
WP_028803572.1 ABC transporter permease subunit [Streptomyces sp. 142MFCol3... 10392.1e-140
WP_095934435.1 ABC transporter permease subunit [Streptomyces sp. Tue6028] ... 10392.2e-140
WP_220293999.1 ABC transporter permease subunit [Streptomyces sp. MBT84] >l... 10314.3e-139
WP_151484651.1 ABC transporter permease [Streptomyces albicerus] 10305.3e-139
WP_059131308.1 ABC transporter permease subunit [Streptomyces sp. NRRL F-51... 10281.2e-138
QIY96025.1 ABC transporter permease [Streptomyces sp. S1D4-11] 10201.7e-137
WP_200417492.1 ABC transporter permease subunit [Streptomyces sp. Y2F8-2] >... 10201.7e-137
WP_095854561.1 ABC transporter permease subunit [Streptomyces sp. Ag82_O1-1... 10201.8e-137
WP_217566591.1 ABC transporter permease [Streptomyces sp. GbtcB7] 10201.8e-137

PSORT result

LocalizationCertaintyPSORT said
membrane0.5140 Seems to have no N-terminal signal seq.