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IDSAVERM_5353 TypeCDS
From6490564 nt length675
To6489890 aa length224
Gene pI10.65
Definitionputative secreted protein M.W (Da)22584
NotePF02706: Chain length determinant protein AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2712 putative membrane protein1872.0e-60
sgrSGR_524 conserved hypothetical protein1303.0e-38
samSAM23877_2742 putative membrane protein2147.0e-71
scabSCAB59091 putative membrane protein2173.0e-72
bsubBG13091 gerPE, yisD; spore germination protein PE309.0e-02

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; bsub, Bacillus subtilis;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_237529562.1 lipopolysaccharide biosynthesis protein [Streptomyces sp. SI... 6364.5e-81
WP_189788520.1 lipopolysaccharide biosynthesis protein [Streptomyces capiti... 5591.9e-69
WP_149830170.1 lipopolysaccharide biosynthesis protein [Streptomyces tailan... 5392.0e-66
WP_152791145.1 lipopolysaccharide biosynthesis protein [Streptomyces phylla... 5374.3e-66
EKX68046.1 chain length determinant protein [Streptomyces ipomoeae 91-03] 5321.2e-65
WP_141569726.1 lipopolysaccharide biosynthesis protein [Streptomyces ipomoe... 5321.7e-65
WP_048819843.1 lipopolysaccharide biosynthesis protein [Streptomyces ipomoe... 5321.8e-65
WP_033322697.1 hypothetical protein [Streptomyces yerevanensis] 5332.0e-65
WP_189320112.1 lipopolysaccharide biosynthesis protein [Streptomyces flaveu... 5322.7e-65
WP_184983924.1 lipopolysaccharide biosynthesis protein [Streptomyces caeles... 5298.8e-65

PSORT result

LocalizationCertaintyPSORT said
membrane0.2466 Seems to have no N-terminal signal seq.