| ID | SAVERM_5367
| Type | CDS
|
| From | 6508321
| nt length | 1644
|
| To | 6509964
| aa length | 547
|
| Gene |
| pI | 5.04
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 60572
|
| Note | PF00005: ABC transporter
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2677 putative ABC transpoter ATP-binding protein | 1017 | 0.0e+00
|
| sgr | SGR_4853 putative ABC transporter ATP-binding protein | 1051 | 0.0e+00
|
| sam | SAM23877_2721 fused putative transporter subunit of ABC superfamily: ATP-binding components | 1018 | 0.0e+00
|
| scab | SCAB59311 putative ABC transporter ATP-binding protein | 1033 | 0.0e+00
|
| sace | SACE_1323 ABC-transporter protein, ATP binding component | 873 | 0.0e+00
|
| nfar | nfa13050 ABC transporter ATP-binding protein | 900 | 0.0e+00
|
| mtub | gi|15609614 PROBABLE MACROLIDE-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER [Mycobacterium tuberculosis H37Rv] | 887 | 0.0e+00
|
| cglu | gi|19553650 COG4184:ABC-type uncharacterized transport system, ATPase component [Corynebacterium glutamicum] | 813 | 0.0e+00
|
| ecoli | gi|16132208 putative ATP-binding component of a transport system [Escherichia coli K12] | 615 | 2.3e-177
|
| paer | PA4595 [gene=PA4595] [prot=probable ATP-binding component of ABC transporter] [comment=PA4595] | 613 | 1.2e-176
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 2 | ABC transporter | 14-181, 331-464 | 171.0 | 1.7e-50
|
| ABC_tran_Xtn | 1 | ABC transporter | 220-290 | 47.8 | 1e-12
|
| DLIC | 1 | Dynein light intermediate chain (DLIC) | 336-395 | 22.9 | 3.2e-05
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_210589808.1 | energy-dependent translational throttle protein EttA [Strept...
| 2672 | 0.0e+00 |
| WP_138047572.1 | energy-dependent translational throttle protein EttA [Strept...
| 2670 | 0.0e+00 |
| WP_075031883.1 | MULTISPECIES: energy-dependent translational throttle protei...
| 2669 | 0.0e+00 |
| WP_079065088.1 | energy-dependent translational throttle protein EttA [Strept...
| 2667 | 0.0e+00 |
| KUN45727.1 | ABC transporter ATP-binding protein [Streptomyces olivochromogene...
| 2665 | 0.0e+00 |
| WP_184893987.1 | energy-dependent translational throttle protein EttA [Strept...
| 2662 | 0.0e+00 |
| WP_151481461.1 | energy-dependent translational throttle protein EttA [Strept...
| 2662 | 0.0e+00 |
|
| 2662 | 0.0e+00 |
| WP_189781489.1 | energy-dependent translational throttle protein EttA [Strept...
| 2655 | 0.0e+00 |
| WP_079036305.1 | MULTISPECIES: energy-dependent translational throttle protei...
| 2655 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0963 | Seems to have no N-terminal signal seq.
|