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IDSAVERM_5384 TypeCDS
From6530589 nt length1212
To6529378 aa length403
Gene pI6.01
Definitionputative ROK-family transcriptional regulator M.W (Da)41907
NotePF00480: ROK family AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryregulation


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO2657 putative ROK-family regulatory protein6400.0e+00
sgrSGR_4874 putative ROK-family transcriptional regulator5860.0e+00
samSAM23877_2707 putative ROK-family transcriptional regulatory protein6270.0e+00
scabSCAB59491 putative ROK-family transcriptional regulator6240.0e+00
saceSACE_1585 ROK-family transcriptional regulator2294.0e-72
paerPA0772 [gene=recO] [prot=DNA repair protein RecO] [comment=PA0772]357.1e-03

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ROK1ROK family89-37889.72.1e-25

MarR_21MarR family20-7334.91e-08

HTH_241Winged helix-turn-helix DNA-binding18-6126.92.3e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_103554020.1 ROK family transcriptional regulator [Streptomyces populi] >... 17850.0e+00
WP_189185007.1 ROK family transcriptional regulator [Streptomyces albiflave... 17830.0e+00
WP_164369298.1 ROK family transcriptional regulator [Streptomyces sp. SID14... 17790.0e+00
WP_081217302.1 ROK family transcriptional regulator [Streptomyces sp. M41(2... 17780.0e+00
WP_054231780.1 MULTISPECIES: ROK family transcriptional regulator [Streptom... 17600.0e+00
WP_067370315.1 ROK family transcriptional regulator [Streptomyces olivochro... 17590.0e+00
WP_153290553.1 ROK family transcriptional regulator [Streptomyces fagopyri]... 17560.0e+00
WP_095854637.1 MULTISPECIES: ROK family transcriptional regulator [unclassi... 17530.0e+00
WP_190168917.1 ROK family transcriptional regulator [Streptomyces mirabilis... 17520.0e+00
WP_168491617.1 MULTISPECIES: ROK family transcriptional regulator [Streptom... 17510.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3061 Seems to have no N-terminal signal seq.