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IDSAVERM_5408 TypeCDS
From6557630 nt length888
To6556743 aa length295
Gene pI7.22
Definitionputative DNA-binding protein M.W (Da)33608
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB61351 putative DNA-binding protein2754.0e-93

*scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain15-8246.14.2e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055533942.1 helix-turn-helix domain-containing protein [Streptomyces gra... 13360.0e+00
WP_187822008.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13200.0e+00
WP_093626804.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13090.0e+00
WP_043669806.1 helix-turn-helix domain-containing protein [Streptomyces xyl... 13014.9e-180
WP_200717684.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12991.2e-179
WP_039653299.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12807.5e-177
WP_189412615.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12686.7e-175
WP_055543991.1 helix-turn-helix domain-containing protein [Streptomyces kan... 12608.3e-174
WP_188286782.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12451.5e-171
WP_215167674.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12451.6e-171

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3345 Seems to have no N-terminal signal seq.