| ID | SAVERM_5447
| Type | CDS
|
| From | 6607644
| nt length | 660
|
| To | 6608303
| aa length | 219
|
| Gene | clpP1
| pI | 5.65
|
| Definition | putative ATP-dependent Clp protease proteolytic subunit 1
| M.W (Da) | 23204
|
| Note | PF00574: Clp protease
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | adaptation to atypical conditions
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2619 clpP1 ATP dependent Clp protease proteolytic subunit | 389 | 3.0e-140
|
| sgr | SGR_4923 putative ATP-dependent Clp protease proteolytic subunit 1 | 307 | 4.0e-108
|
| sam | SAM23877_2668 proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine protease | 360 | 5.0e-129
|
| scab | SCAB59941 putative ATP-dependent Clp protease proteolytic subunit 1 | 363 | 3.0e-130
|
| nfar | nfa13330 clpP1 Clp protease proteolytic subunit | 241 | 2.8e-65
|
| mtub | gi|57116992 ATP-dependent Clp protease proteolytic subunit [Mycobacterium tuberculosis H37Rv] | 214 | 4.8e-57
|
| cglu | gi|19553610 COG0740:Protease subunit of ATP-dependent Clp proteases [Corynebacterium glutamicum] | 241 | 1.5e-65
|
| bsub | BG19016 clpP, yvdN; ATP-dependent Clp protease proteolytic subunit (class III heat-shock protein) [EC:3.4.21.92] | 204 | 2.6e-54
|
| ecoli | gi|16128422 ATP-dependent Clp protease proteolytic subunit [Escherichia coli K12] | 213 | 6.3e-57
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| CLP_protease | 1 | Clp protease | 33-205 | 259.0 | 2.2e-77
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
|
| 988 | 8.3e-135 |
| GHA56770.1 | ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces t...
| 979 | 1.1e-133 |
| SFG40562.1 | ATP-dependent Clp protease proteolytic subunit ClpP [Streptomyce...
| 978 | 1.5e-133 |
| GGX54883.1 | ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces f...
| 978 | 1.7e-133 |
|
| 979 | 2.1e-133 |
| PKT70744.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces popu...
| 978 | 3.1e-133 |
| GHB23381.1 | ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces u...
| 975 | 5.1e-133 |
| SHI23425.1 | ATP-dependent Clp protease proteolytic subunit ClpP [Streptomyce...
| 974 | 7.4e-133 |
| QDN57673.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces sp. ...
| 975 | 7.5e-133 |
| BCL30663.1 | ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces g...
| 968 | 5.7e-132 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1362 | Seems to have no N-terminal signal seq.
|