| ID | SAVERM_5448
| Type | CDS
|
| From | 6608414
| nt length | 681
|
| To | 6609094
| aa length | 226
|
| Gene | clpP2
| pI | 4.72
|
| Definition | putative ATP-dependent Clp protease proteolytic subunit 2
| M.W (Da) | 24919
|
| Note | PF00574: Clp protease
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | adaptation to atypical conditions
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2618 clpP2 ATP dependent Clp protease proteolytic subunit | 408 | 2.0e-147
|
| sgr | SGR_4924 putative ATP-dependent Clp protease proteolytic subunit 2 | 370 | 8.0e-133
|
| sam | SAM23877_2667 proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine protease | 415 | 2.0e-150
|
| scab | SCAB59951 putative ATP-dependent Clp protease proteolytic subunit 2 | 413 | 2.0e-149
|
| sace | SACE_1361 ATP-dependent Clp protease proteolytic subunit 2 | 272 | 4.0e-94
|
| nfar | nfa13340 clpP2 Clp protease proteolytic subunit | 270 | 5.9e-74
|
| mtub | gi|15609597 ATP-dependent Clp protease proteolytic subunit [Mycobacterium tuberculosis H37Rv] | 269 | 1.3e-73
|
| cglu | gi|19553609 COG0740:Protease subunit of ATP-dependent Clp proteases [Corynebacterium glutamicum] | 276 | 4.5e-76
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| CLP_protease | 1 | Clp protease | 37-217 | 255.6 | 2.3e-76
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_168528110.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces...
| 1115 | 5.5e-154 |
| WP_153290595.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces...
| 1115 | 6.4e-154 |
| WP_151471407.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces...
| 1114 | 1.0e-153 |
| WP_099499280.1 | MULTISPECIES: ATP-dependent Clp protease proteolytic subunit...
| 1111 | 2.4e-153 |
| WP_095934325.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces...
| 1107 | 9.4e-153 |
| WP_037618822.1 | MULTISPECIES: ATP-dependent Clp protease proteolytic subunit...
| 1107 | 1.2e-152 |
| WP_081217263.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces...
| 1105 | 2.5e-152 |
| WP_055611888.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces...
| 1104 | 2.9e-152 |
| WP_148013970.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces...
| 1104 | 3.0e-152 |
| WP_151481575.1 | ATP-dependent Clp protease proteolytic subunit [Streptomyces...
| 1103 | 4.5e-152 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1277 | Seems to have no N-terminal signal seq.
|