| ID | SAVERM_5480
| Type | CDS
|
| From | 6652631
| nt length | 447
|
| To | 6653077
| aa length | 148
|
| Gene |
| pI | 4.4
|
| Definition | hypothetical protein
| M.W (Da) | 16532
|
| Note | PF02410: Domain of unknown function DUF143
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2577 hypothetical protein | 255 | 1.0e-89
|
| sgr | SGR_4970 conserved hypothetical protein | 236 | 2.0e-82
|
| sam | SAM23877_2627 Ribosomal silencing factor RsfS | 256 | 5.0e-90
|
| scab | SCAB60301 hypothetical protein | 255 | 2.0e-89
|
| sace | SACE_1432 hypothetical protein | 116 | 6.0e-35
|
| nfar | nfa13770 hypothetical protein | 149 | 9.9e-38
|
| mtub | gi|15609557 hypothetical protein Rv2420c [Mycobacterium tuberculosis H37Rv] | 137 | 3.9e-34
|
| cglu | gi|19553550 COG0799:Uncharacterized ACR (homolog of plant Iojap proteins) [Corynebacterium glutamicum] | 124 | 2.5e-30
|
| bsub | BG11640 yqeL; similar to unknown proteins | 90 | 2.9e-20
|
| ecoli | gi|49176039 hypothetical protein b0637 [Escherichia coli K12] | 53 | 5.7e-09
|
| paer | PA4005 [gene=PA4005] [prot=conserved hypothetical protein] [comment=PA4005] | 84 | 4.1e-18
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| RsfS | 1 | Ribosomal silencing factor during starvation | 14-109 | 77.3 | 8.3e-22
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1660 | Seems to have no N-terminal signal seq.
|