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IDSAVERM_5551 TypeCDS
From6713593 nt length1218
To6714810 aa length405
Gene pI6.03
Definitionhypothetical protein M.W (Da)43853
NotePF01381: Helix-turn-helix AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categoryphage-related functions


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
nfarnfa48030 hypothetical protein1302.7e-31

*nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_191Helix-turn-helix domain6-7132.36.9e-08

HTH_311Helix-turn-helix domain5-7230.43.5e-07

HTH_31Helix-turn-helix9-6628.31.3e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_079105516.1 helix-turn-helix domain-containing protein [Streptomyces hyg... 16760.0e+00
WP_207822501.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 16700.0e+00
WP_237513624.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 16460.0e+00
WP_069779678.1 helix-turn-helix domain-containing protein [Streptomyces fod... 16430.0e+00
WP_046916288.1 helix-turn-helix domain-containing protein [Streptomyces ste... 16350.0e+00
WP_093696978.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 16160.0e+00
KMS91727.1 XRE family transcriptional regulator [Streptomyces regensis] 16070.0e+00
KJY41501.1 XRE family transcriptional regulator [Streptomyces sp. NRRL B-156... 16050.0e+00
WP_058925342.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15920.0e+00
WP_119994479.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15910.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3122 Seems to have no N-terminal signal seq.