| ID | SAVERM_5569
| Type | CDS
|
| From | 6739510
| nt length | 1017
|
| To | 6740526
| aa length | 338
|
| Gene | hrcA
| pI | 5.02
|
| Definition | putative HrcA-family heat-inducible transcriptional repressor protein
| M.W (Da) | 36661
|
| Note | negatively regulate the transcription of heat shock genes
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2555 heat-inducible transcriptional repressor HrcA. | 629 | 0.0e+00
|
| sgr | SGR_4993 putative HrcA-family repressor protein | 606 | 0.0e+00
|
| sam | SAM23877_2600 Heat-inducible transcription repressor HrcA | 626 | 0.0e+00
|
| scab | SCAB61551 putative oxygen-independent coproporphyrinogen III oxidase | 635 | 0.0e+00
|
| sace | SACE_1479 putative heat-inducible transcription repressor | 409 | 2.0e-144
|
| nfar | nfa14250 transcriptional repressor | 379 | 1.5e-106
|
| mtub | gi|15609511 heat-inducible transcription repressor [Mycobacterium tuberculosis H37Rv] | 367 | 8.0e-103
|
| cglu | gi|19553489 COG1420:Transcriptional regulator of heat shock gene [Corynebacterium glutamicum] | 307 | 4.1e-85
|
| bsub | BG10662 hrcA, yqxE, yqeS; transcriptional repressor of class I heat-shock genes | 167 | 6.2e-43
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| HrcA | 1 | HrcA protein C terminal domain | 103-321 | 212.3 | 7.4e-63
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_019064191.1 | heat-inducible transcriptional repressor HrcA [Streptomyces ...
| 1354 | 0.0e+00 |
| WP_053750789.1 | heat-inducible transcriptional repressor HrcA [Streptomyces ...
| 1351 | 0.0e+00 |
| WP_107464092.1 | heat-inducible transcriptional repressor HrcA [Streptomyces ...
| 1349 | 0.0e+00 |
| WP_033320927.1 | heat-inducible transcriptional repressor HrcA [Streptomyces ...
| 1349 | 0.0e+00 |
| WP_053190534.1 | heat-inducible transcriptional repressor HrcA [Streptomyces ...
| 1349 | 0.0e+00 |
| WP_165341899.1 | MULTISPECIES: heat-inducible transcriptional repressor HrcA ...
| 1348 | 0.0e+00 |
| GGK45407.1 | heat-inducible transcription repressor HrcA [Streptomyces flaveu...
| 1348 | 0.0e+00 |
| WP_019074081.1 | MULTISPECIES: heat-inducible transcriptional repressor HrcA ...
| 1348 | 0.0e+00 |
| WP_159767340.1 | heat-inducible transcriptional repressor HrcA [Streptomyces ...
| 1348 | 0.0e+00 |
| WP_189185132.1 | heat-inducible transcriptional repressor HrcA [Streptomyces ...
| 1348 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1765 | Seems to have no N-terminal signal seq.
|