| ID | SAVERM_5581
| Type | CDS
|
| From | 6753649
| nt length | 1587
|
| To | 6755235
| aa length | 528
|
| Gene | gudD
| pI | 5.34
|
| Definition | putative glucarate dehydratase
| M.W (Da) | 56102
|
| Note | PF01188: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO2542 putative dehydratase. | 793 | 0.0e+00
|
| sgr | SGR_5812 putative glucarate dehydratase | 622 | 0.0e+00
|
| sam | SAM23877_0538 D-glucarate dehydratase | 233 | 1.0e-71
|
| scab | SCAB61661 putative glucarate dehydratase | 748 | 0.0e+00
|
| sace | SACE_4841 mandelate racemase/muconate lactonizing enzyme | 452 | 6.0e-157
|
| nfar | nfa35070 glucarate dehydratase | 248 | 7.0e-67
|
| cglu | gi|19553600 COG1441:O-succinylbenzoate synthase and related enzymes [Corynebacterium glutamicum] | 104 | 8.8e-24
|
| bsub | BG11161 ycbF; glucarate dehydratase [EC:4.2.1.40] | 228 | 5.1e-61
|
| ecoli | gi|16130694 (D)-glucarate dehydratase 1 [Escherichia coli K12] | 242 | 5.0e-65
|
| paer | PA2509 [gene=catB] [prot=muconate cycloisomerase I] [comment=PA2509] | 80 | 3.5e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| MR_MLE_C | 1 | Enolase C-terminal domain-like | 181-391 | 174.9 | 1.7e-51
|
| MR_MLE_N | 1 | Mandelate racemase / muconate lactonizing enzyme, N-terminal domain | 35-141 | 31.0 | 2.3e-07
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_030980359.1 | glucarate dehydratase family protein [Streptomyces sp. NRRL ...
| 1955 | 0.0e+00 |
| WP_030675534.1 | glucarate dehydratase family protein [Streptomyces cellulosa...
| 1947 | 0.0e+00 |
| NUR02949.1 | glucarate dehydratase [Streptomyces sp.]
| 1944 | 0.0e+00 |
| WP_093770876.1 | MULTISPECIES: glucarate dehydratase family protein [unclassi...
| 1944 | 0.0e+00 |
| WP_030180951.1 | glucarate dehydratase family protein [Streptomyces violaceor...
| 1940 | 0.0e+00 |
| WP_232027362.1 | glucarate dehydratase family protein [Streptomyces lincolnen...
| 1938 | 0.0e+00 |
| MPY46434.1 | glucarate dehydratase [Streptomyces phyllanthi]
| 1937 | 0.0e+00 |
| WP_030601758.1 | glucarate dehydratase family protein [Streptomyces fulvoviol...
| 1937 | 0.0e+00 |
| WP_048585646.1 | glucarate dehydratase family protein [Streptomyces viridochr...
| 1937 | 0.0e+00 |
| WP_030934934.1 | glucarate dehydratase family protein [Streptomyces sp. NRRL ...
| 1936 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2058 | Seems to have no N-terminal signal seq.
|