| ID | SAVERM_5593
| Type | CDS
|
| From | 6766509
| nt length | 339
|
| To | 6766171
| aa length | 112
|
| Gene | glnB2
| pI | 6.54
|
| Definition | putative nitrogen regulatory protein P-II
| M.W (Da) | 12183
|
| Note | regulatory protein for glutamine synthetase; glnB-homolog; PF00543: Nitrogen regulatory protein P-II
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| scab | SCAB61751 putative nitrogen regulatory protein P-II | 208 | 4.0e-72
|
| sace | SACE_6061 nitrogen regulatory protein PII | 152 | 4.0e-50
|
| nfar | nfa41630 glnB nitrogen regulatory protein P-II | 171 | 1.3e-44
|
| mtub | gi|15610056 PROBABLE NITROGEN REGULATORY PROTEIN P-II GLNB [Mycobacterium tuberculosis H37Rv] | 171 | 8.1e-45
|
| cglu | gi|19553261 COG0347:Nitrogen regulatory protein PII [Corynebacterium glutamicum] | 154 | 7.6e-40
|
| bsub | BG10870 nrgB; nitrogen regulatory pII-like protein | 82 | 4.5e-18
|
| ecoli | gi|16130478 regulatory protein (P-II) for nitrogen assimilation by glutamine synthetase (ATase) [Escherichia coli K12] | 139 | 4.5e-35
|
| paer | PA5288 [gene=glnK] [prot=nitrogen regulatory protein P-II 2] [comment=PA5288] | 147 | 2.2e-37
|
*scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| P-II | 1 | Nitrogen regulatory protein P-II | 4-105 | 138.9 | 7.1e-41
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_201049101.1 | P-II family nitrogen regulator [Streptomyces sp. MBT53] >lcl...
| 353 | 1.8e-41 |
| WP_200712886.1 | P-II family nitrogen regulator [Streptomyces sp. MBT62] >lcl...
| 353 | 2.0e-41 |
| WP_019074107.1 | P-II family nitrogen regulator [Streptomyces hokutonensis]
| 352 | 2.4e-41 |
| WP_200682139.1 | P-II family nitrogen regulator [Streptomyces sp. MBT65] >lcl...
| 352 | 2.7e-41 |
| WP_033285968.1 | P-II family nitrogen regulator [Streptomyces sp. NRRL F-525]
| 352 | 2.8e-41 |
| WP_225821224.1 | P-II family nitrogen regulator [Streptomyces sp. TML10]
| 351 | 3.2e-41 |
| WP_161297437.1 | MULTISPECIES: P-II family nitrogen regulator [unclassified S...
| 351 | 3.2e-41 |
| WP_030344948.1 | MULTISPECIES: P-II family nitrogen regulator [unclassified S...
| 351 | 3.4e-41 |
| WP_201830995.1 | P-II family nitrogen regulator [Streptomyces actinomycinicus...
| 351 | 3.4e-41 |
| WP_093626571.1 | P-II family nitrogen regulator [Streptomyces sp. 3213.3] >em...
| 351 | 3.4e-41 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2630 | Seems to have no N-terminal signal seq.
|