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IDSAVERM_5609 TypeCDS
From6786649 nt length1959
To6784691 aa length652
GeneoppC7 pI8.5
Definitionputative peptide ABC transporter permease protein M.W (Da)69215
NotePF00005: ABC transporter AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_6424 putative ABC transporter permease and ATPase components7410.0e+00
samSAM23877_7060 putative dipeptide ABC transporter permease and ATP-binding protein2942.0e-91
scabSCAB86511 putative peptide ABC transporter permease protein2883.0e-90
cglugi|19553851 COG1173:ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Corynebacterium glutamicum]6690.0e+00

*sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; cglu, Corynebacterium glutamicum;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter355-50387.88.4e-25

BPD_transp_11Binding-protein-dependent transport system inner membrane component104-27673.81.3e-20

oligo_HPY1Oligopeptide/dipeptide transporter, C-terminal region555-61960.61.4e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_143601595.1 MULTISPECIES: dipeptide/oligopeptide/nickel ABC transporter ... 24100.0e+00
WP_143608038.1 MULTISPECIES: dipeptide/oligopeptide/nickel ABC transporter ... 24100.0e+00
WP_143613342.1 MULTISPECIES: dipeptide/oligopeptide/nickel ABC transporter ... 24090.0e+00
WP_095854759.1 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-b... 24080.0e+00
WP_097225983.1 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-b... 24080.0e+00
WP_107437762.1 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-b... 24050.0e+00
WP_181651382.1 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-b... 24040.0e+00
WP_096239748.1 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-b... 24020.0e+00
KUN46091.1 ABC transporter [Streptomyces olivochromogenes] 24010.0e+00
WP_217565678.1 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-b... 23990.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.4800 Seems to have no N-terminal signal seq.